Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2888 95.1 1e-13 >seq2888 Length=149780 Score = 95.1 bits (104), Expect = 1e-13 Identities = 174/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | |||||||| ||||| || ||||| || | || | || || |||||| Sbjct 92812 GGTATCGATCTCGGAACCACCTATAGCTGCGTTGGAGTATTCCAGCACGGAAAGGTTGAA 92753 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| || || ||| | || || || || ||||| | ||||| || || Sbjct 92752 ATTATTGCCAATGACCAGGGCAACCGTACGACGCCGTCCTATGTGGCCTTCACCGATACG 92693 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | || ||||| || || | || | | | || || || || || || Sbjct 92692 GAGCGTCTGATCGGCGATGCCGCCAAGAACCAGGTCGCCATGAACCCGACGAACACAATC 92633 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || || || || || | || || | | || | || || | | ||||| || ||| Sbjct 92632 TTCGACGCCAAGCGCCTGATCGGTCGCAAGTTCGACGACCCGGCCATCCAGGCTGACATG 92573 Query 550238 AAGCATTGGCCTTTC 550252 ||||| ||||| ||| Sbjct 92572 AAGCACTGGCCGTTC 92558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028788731780080