Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8899 132 4e-26 seq9325 109 4e-19 seq9239 98.7 8e-16 >seq8899 Length=3132144 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| || | | || | | |||| |||| ||| Sbjct 384477 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCATCCTCCAGCTGC 384536 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || |||| |||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 384537 TTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATCCTGAATTTTC 384596 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| |||| || || ||||| |||| || ||||| || Sbjct 384597 GCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTG 384656 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 384657 AGGGTTTTCACGAAAATCTGCAT 384679 >seq9325 Length=2359367 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 |||||||| | | ||| | ||| || |||||||| ||||| || || || ||||| ||| Sbjct 261133 TTTCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCG 261074 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | | ||| | | || |||| ||||| || || || ||||||||||| ||||| || Sbjct 261073 GACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGG 261014 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 ||||| || || || || || || || || || | || | ||||| || | || Sbjct 261013 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCG 260954 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||||| || ||||| || | || || || || |||||||| Sbjct 260953 ACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 >seq9239 Length=1433044 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710 || ||| || | |||||||||||| | ||||||| || ||||||||| |||| || Sbjct 683247 ATCGAACTTCCTTTTACAACCTTCGTAGTTCATGTATCTTATTTTACCGAAGATGTCCCG 683306 Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770 ||| |||| | |||||||| |||| || ||||||||||||||| | || ||||| Sbjct 683307 TTCCTTCCATCCCTGATCGTGAATTCCAGCGATCGACCACATGCAACCGACGTACCCGTT 683366 Query 13771 GGGATCGCGTCCATCCAAACTGTA 13794 || ||||| ||||| | ||||| Sbjct 683367 CGGGTCGCGCCCATCTAGGCTGTA 683390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396232074064344