Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq9200 104 3e-17 >seq9200 Length=514349 Score = 104 bits (114), Expect = 3e-17 Identities = 184/264 (70%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 |||||| ||||| ||||| |||||||| || || || | | ||| | ||| || Sbjct 237425 CAGATCGTCGTCCGAGAAGCCGGTACCGATTTTGCAGATCGTCTGATACTCTTCGTTCTC 237366 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCA--CCCCG 197139 | | ||| || ||||| | ||| | ||||| || || || | ||| ||| ||||| Sbjct 237365 GTCGTCGTAGCAAGCGAGCAGGAAGCCACCGTACGTGCCGGTACGCTTGCCCCGGCCCCG 237306 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | |||| |||||||| |||||||| || | || | |||||| | |||||| ||| Sbjct 237305 AT--AGCCACCGATAACGACCAGATCGAGCGAATCACCCACCCCGCTAAGGTAATCCTTC 237248 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACG-TCCAG 197258 ||||| || | ||| | | || | || || |||||||| ||||||| ||| | || Sbjct 237247 TTCAGCTTCAACCAATTGCGCGACCGTTTCGCGATCTCGTACGTTGCGTC-ACGCTGGAG 237189 Query 197259 GGTCTTGATCATCAATCCCTCGCA 197282 || || | |||||||||||| || Sbjct 237188 CGTTTTCACCATCAATCCCTCACA 237165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676648460120960