Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 333 5e-86
seq9141 122 2e-22
seq9254 107 4e-18
>seq9207
Length=1443628
Score = 333 bits (368), Expect = 5e-86
Identities = 882/1326 (67%), Gaps = 62/1326 (5%)
Strand=Plus/Minus
Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959
||| || ||||||| | |||||| || || || ||||| | || | ||| | ||| ||
Sbjct 1178826 CAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGA 1178767
Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019
|||||| ||||||| ||||||||| |||||||| || || ||| ||| || |||||
Sbjct 1178766 AGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCAT 1178707
Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC 213079
|| |||| |||||| |||| | || |||| | | || | ||||| ||
Sbjct 1178706 CGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGC 1178647
Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTC---GTCCTTCACGTTCCACATGTCAAACTGCAA 213136
||||| ||| ||||||| | |||| | ||||||||| ||||||
Sbjct 1178646 CCAGTTCCA---------CAGGTCCGTTGGGGTCTTCTC---CCACATGTCGTACTGCAG 1178599
Query 213137 GATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAG 213196
||| || |||||||| || | ||||| ||| | ||| || || | |||||
Sbjct 1178598 GATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAA 1178539
Query 213197 CTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256
||| ||| |||| ||| || | ||||||||||| ||||| |||| | ||| |||||
Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479
Query 213257 CTTGGCCTC------TGGGGACGTGAAGG-GCATCATCATGCGTTGGAACACATCAGCCA 213309
| || || | | ||| || || |||| | ||| ||| |||| ||||
Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACG-GATGGCGCATGAGAATG------AACGCATCGGCCA 1178426
Query 213310 GCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCT 213366
||||| || ||||| ||||| |||| ||| | || ||| || ||| | ||||
Sbjct 1178425 TTCCCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGC---CTCCG 1178369
Query 213367 CCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGA 213426
|| ||||| ||||| ||||||||| ||||| |||||||| ||| | | |||| ||
Sbjct 1178368 GCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGA 1178309
Query 213427 CATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGG 213486
| | ||| | | || | | || || ||| ||| ||||||| ||| |
Sbjct 1178308 CCTCCTTCAGCTTCACGAAGTCGTAC--GTGCGATCCGGCCT-CACAAACATGTTCAGCG 1178252
Query 213487 CGATGCTGGCCAGGTTGCAAACGGCCA---CCTCCTGAGAGTCTGTGTACTCCATGATCT 213543
| || ||||| ||||| || || | | |||| || | |||||| | |||||
Sbjct 1178251 CAATCGACGCCAGATTGCACACCGCAATTTCGTCCTTCGAC---GAGTACTCGACGATCT 1178195
Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGG 213603
| ||||||||||| ||| ||| ||||||| |||||| ||||| ||| ||||
Sbjct 1178194 CCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGC 1178135
Query 213604 CAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC 213663
| |||||||||||||||||| || || ||||| | ||| ||| | | ||| |
Sbjct 1178134 ACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGA 1178075
Query 213664 TCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTA--CT 213720
||| || | |||| ||||| ||| ||| ||| || | | |||||| |
Sbjct 1178074 ACCACAGAT-CCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTT---CTCGTAGCCC 1178019
Query 213721 GTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAGGA-TGC 213778
|| ||| ||| | || || | |||||| ||| | | | || || || ||| |||
Sbjct 1178018 GT--GTACAGCCGCTCAAACTCTTCGCCCCACGACTCCGAC-AGCCCGGGGCAGTCGTGC 1177962
Query 213779 GGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGA 213837
|| |||||| |||||||| ||| | ||| || | || ||||||||| ||||| |
Sbjct 1177961 GG-ACACATAAGGCTCCACATTTCGTTCGCCTCC-ACCCGCTTCATGAACAGATCCGGCA 1177904
Query 213838 CCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCA 213897
||||||||||| ||||| ||| | | | ||| ||| |||| |||||| ||
Sbjct 1177903 CCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCA 1177844
Query 213898 GATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG 213957
|||| ||||| ||||| | || | ||||||||||| | ||||||||| || || || |
Sbjct 1177843 GATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGG 1177784
Query 213958 ---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGG 214014
|| | ||||||||||||||||| || |||| ||||| ||| ||||| | |
Sbjct 1177783 GACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCG 1177724
Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT 214074
| |||| ||||||||| ||||| || ||||| || |||| || |||| | |
Sbjct 1177723 GAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGC 1177664
Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAG 214134
| || | || || ||||| |||||| |||||||||||| ||||| || ||| |
Sbjct 1177663 AGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCG 1177604
Query 214135 TCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCT 214194
| || || || | || ||||| || | | | || | |||||| ||| || |
Sbjct 1177603 TGTCGTAAATTCCCTCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTT 1177544
Query 214195 GGGGCC 214200
||||||
Sbjct 1177543 GGGGCC 1177538
>seq9141
Length=1064938
Score = 122 bits (134), Expect = 2e-22
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548
||| ||| ||||||| || ||||||||| || |||||| || ||||| ||||| |||||
Sbjct 60362 CTTCAGCTCCTTCACCTTGTCCTCCAGCTTCGAGATGCGCTCGAGTTTCCGCCGCCGGCA 60421
Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608
|||| ||| |||| || ||||| |||| ||| || || ||||||||| ||||||
Sbjct 60422 CTTGGAGGCGGCCACCCGATTCCGTAGTCGCTTCCGCTCGAGCTTGATGCGCTCCTGGGA 60481
Query 241609 CTCCATGTCGATCGG 241623
|||||||||||||||
Sbjct 60482 CTCCATGTCGATCGG 60496
>seq9254
Length=4138565
Score = 107 bits (118), Expect = 4e-18
Identities = 166/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||| |||||||| | ||||||||| ||||| || || ||| |||| |||||| |
Sbjct 2197227 GCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTTCGAGAAGGTCAA 2197286
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|| ||||| | || | || || |||||||| || || || || ||| ||||||
Sbjct 2197287 GCCTGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCTGCCGCTGAAGAA 2197346
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
|| ||||| || || || |||||| | | ||| ||||| || |||||| ||
Sbjct 2197347 AATTCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAGTTGGCTTTCTTGCTCGA 2197406
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
|||||| || |||||||| ||||||||||| | || || | ||| || |||||
Sbjct 2197407 AATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACACACGGTAGCGTTTCGATGGC 2197463
Score = 84.2 bits (92), Expect = 4e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||| ||| || || || || ||||||||||| || |||||| | || ||
Sbjct 2197600 GTACATCTCGCTGTGGACGTTTTCCATCGCGATCTGGAAACCATAGAAGCAGCGCGCTTC 2197659
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|||||||||||| | ||||| || | ||||||||| ||||| || || || ||
Sbjct 2197660 GGTCACCTGCACTTCCTGGCTGAATCGTTCGACCAGATTCTCGTTGACGATTCCGTCCGA 2197719
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| || ||||| || || || || | ||| || || ||| | | | | | |
Sbjct 2197720 TGCGGCGAAGAAAGCGAGCACGTGCGAGATGAAGTGACGTTCGCTCGGTTTCAACGACTC 2197779
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|||| ||| | ||| || ||||| || || || || |||||||| || ||
Sbjct 2197780 CCAGTCCTTCATGTCCTTCGAGAGGTCTACCTCCTCTACCGTCCAGAAAGATGC 2197833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931421109217280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |