Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 251 1e-61
seq9254 95.1 2e-14
>seq9207
Length=1443628
Score = 251 bits (278), Expect = 1e-61
Identities = 706/1068 (66%), Gaps = 38/1068 (4%)
Strand=Plus/Minus
Query 221356 CACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTG 221415
|||||||| || ||||||| ||||| ||||||| | ||||| | || | |
Sbjct 1178586 CACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACA-GCTAG 1178528
Query 221416 CGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCG 221473
| || || || | | ||||||||||||||||||| || ||| || || ||| || ||
Sbjct 1178527 CCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAG-CTTTTGTGCTTCC 1178469
Query 221474 GGAGAAGTGAAGGGCATACGCAGCATCTGAAAGA---CGTCGGCCAGTCCCTGTACTCCG 221530
| | | || | | |||| ||| || | ||||||| |||||| || |||
Sbjct 1178468 TCACTTTCGTACGG---ATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCG 1178412
Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTG 221590
|||||||| || | ||| | | |||||||| ||| || ||||| || || |||||
Sbjct 1178411 ATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTG 1178352
Query 221591 ACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650
| |||||| | ||||| ||||| | |||| || || | ||||| ||||||||
Sbjct 1178351 ATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTC--- 1178295
Query 221651 TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACG 221710
|| || ||| ||| | | || |||||| ||| || ||||
Sbjct 1178294 ---------ACGAAGTCGTA--CGT-GCGATCCGGCCTCACAAACATGTTCAGCGCAATC 1178247
Query 221711 CTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAG 221770
||||| || ||||| || | |||||||| | |||| | |||||| || ||
Sbjct 1178246 GACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCAC 1178187
Query 221771 AGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCC 221830
||||| ||||||||| || |||| || | || || ||| || ||| || |||
Sbjct 1178186 AGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCC 1178127
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||||||||| | || |||| ||||| | ||| | | | | ||| | ||| ||
Sbjct 1178126 TTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGA 1178067
Query 221891 TCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAG 221949
|| ||| || ||||| || ||| ||| || ||| || || || || || ||
Sbjct 1178066 TC-CTGCGCCTTCACCTGCCGGATGAACCGACCTTC---CTTCTCGTAGCCCGTGTACAG 1178011
Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAG 222009
| ||||||| ||| || ||| ||| ||| || || || | |||||||| ||
Sbjct 1178010 CCGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAG 1177951
Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069
||||| | ||| | | |||| || |||||| || ||||| | ||||||||| |
Sbjct 1177950 GCTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTA 1177891
Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129
|| | || | | || ||||||| ||| |||||||| ||||||| | ||||||
Sbjct 1177890 GAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTC 1177831
Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189
||| | || | ||||||||||| || |||| ||| | || ||||| |||||||||||
Sbjct 1177830 AAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCC 1177771
Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249
||||| ||||| || || |||| ||| || || |||| |||| |||||
Sbjct 1177770 GCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTT 1177711
Query 222250 GGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCA--GA 222306
||| |||||| |||||| |||||||| ||| |||| || | | | |||
Sbjct 1177710 GGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCC---GGATGCAGTGCACGTT 1177654
Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366
|| || || || |||||| || ||||||| ||||| ||| || ||||| ||
Sbjct 1177653 CAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAAT 1177594
Query 222367 GCCCTCCATAGAGTCCTCCTTGA-CGTTCAGCAGAAAACAAGACGACA 222413
||||| ||| ||| ||| | |||| || ||||| || |||||||
Sbjct 1177593 TCCCTCGATACTGTCGTCCGACATCGTT-AGGAGAAAGCAGGACGACA 1177547
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| ||||| ||||| || ||||| ||||| | || | ||| | ||| |||||| ||||
Sbjct 1178817 GTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGG 1178758
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| ||||||||||||||| || || |||||| |||||| ||||| |||||||
Sbjct 1178757 CTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAG 1178698
Query 221236 CAGCAG 221241
||| ||
Sbjct 1178697 CAGGAG 1178692
>seq9254
Length=4138565
Score = 95.1 bits (104), Expect = 2e-14
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845
||||| ||||||||| |||| | | |||| |||||| ||||| ||||
Sbjct 2197472 CTGTTCAATGCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAAC 2197413
Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905
||||| ||| ||| || | || |||||||| | || || ||||| || || |||
Sbjct 2197412 TGGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAG 2197353
Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CAT 25964
|| || || |||||||| ||||| || ||||||||||| ||| || | |||| ||
Sbjct 2197352 GGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAG-CGAGGACTGAT 2197294
Query 25965 GCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTT 26024
||| || || ||| || |||||||| || | |||||||| | ||| | || ||
Sbjct 2197293 GCCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTT 2197234
Query 26025 TGCCTGCCT 26033
||| |||||
Sbjct 2197233 TGCTTGCCT 2197225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928733431508480
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