Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 116 4e-21
seq9207 111 2e-19
>seq9254
Length=4138565
Score = 116 bits (128), Expect = 4e-21
Identities = 276/413 (67%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| ||||||| || ||| ||||| |||||||| || |||| ||| | || || | |
Sbjct 2756266 TCCACAAACTCCCGCACCGAGTGCGTCTCCCCAGTGGCGATGACAAAATCTTCCGGTTTG 2756325
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
|| || || | ||| ||||||||||| || || ||||| |||||||| |||||||| |
Sbjct 2756326 TCCTGCTGCATCATTAGCCACATGGCCTCCACGTAGTCTTTGGCATGCCCCCAGTCACGC 2756385
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
| || || || || || || | | |||| || || | |||| ||
Sbjct 2756386 TTGGAGTCAAGATTGCCCAGCTCCAAGCACTCCTGCTGGCCAAGCGAGATTT-----TCG 2756440
Query 177739 CCA-TCA----GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGT 177793
||| | | || ||||| |||||||| | | || || | ||| || |||||||
Sbjct 2756441 CCACTGACCGGGTTATCTTGCGGGTGACAAAATTCTCTCCCCGCCGCGGAGACTCGTGGT 2756500
Query 177794 TGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCC 177853
| || || || || ||||||| |||| | || | ||| ||||||||| | || | ||
Sbjct 2756501 TAAAAAGAATGCCATTGCAGGCAAACATGTCGTACGCTTCGCGGTAATTTATCACAATCC 2756560
Query 177854 AGTGAGCGGCCAATTTGG-AGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCA 177912
||| || || |||| | | | | || || || || ||||||||||| | |||
Sbjct 2756561 AGTAGCCGTACATCTTGGCACAAG-CGTACGGCGAACGCGGATAGAAGGGTGTTTTTTCA 2756619
Query 177913 GTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
| ||||| ||||| || || || | | ||||||||| || || |||||
Sbjct 2756620 TTCTGTGGCGTTTCCACCACCTTGCCGTAAAGCTCCGAAGTGGATGCCTGGTA 2756672
>seq9207
Length=1443628
Score = 111 bits (122), Expect = 2e-19
Identities = 435/676 (64%), Gaps = 11/676 (2%)
Strand=Plus/Plus
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| || ||||| ||||||||||| || ||| |||||| ||||| |||| |||| ||
Sbjct 1178110 CCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAACCAGCAGAACGTGGGCACG 1178169
Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036
|||||| |||| || || |||||||| || | |||||| | ||||| || | ||
Sbjct 1178170 ATCAAGTGCTCGAACCTGTGCACGGAGATCGTCGAGTACTCGTCGAAGGACGAAATTGCG 1178229
Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096
|| |||||| |||| || || || || | || ||| | || |||||| |
Sbjct 1178230 GTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTGTGAGGCCGGA---TCGCACGTAC 1178286
Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156
|| | | || || | || || | ||||| || || || || ||| | ||||
Sbjct 1178287 GACTTCGTGAAGCTGAAGGAGGTCGCCAAGATCGTCACGCGCAACCTGAACAAAATCATC 1178346
Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAA--AGTCTAATATGCGACACAGACCTA 76214
|||| || | || |||| || | ||||| || || ||||| ||| ||||||
Sbjct 1178347 GACATCAACTACTA-CCCGGTGCCGGAG-GCGAAGCGTTCCAACATGCGCCACCGACCTA 1178404
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
| ||| | || || || || | || |||| || ||| | ||| | | | ||
Sbjct 1178405 TCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCATTCTCATGCGCCATCCGTACGAAA 1178464
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
|| ||||| | || |||| | |||||||| ||||| || | | | ||||
Sbjct 1178465 GTGAGGAAGCACAAAAGCTGAACCAGCAGATCTTTGAGACCATCTACTATGGCGCTCTGG 1178524
Query 76335 AGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394
|||| || ||||| ||||| | | | ||| | || || || | ||||| | ||| |
Sbjct 1178525 AGGCTAGCTGTGAGTTGGCCGCCCGCGACGGTCCGTACGAAACGTACGAGGGCTGTCCGG 1178584
Query 76395 CGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--A 76452
| | | || | || |||| || ||||||| || || |||| | | || | |
Sbjct 1178585 TGAGCAAGGGAATCCTGCAGTACGACATGTGGG-AGAAGACCCCAA-CGGACCTGTGGAA 1178642
Query 76453 CTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 76512
||||| | || |||||| || || | ||| | || || || || ||||
Sbjct 1178643 CTGGGCCGAGCTGAAGGAAAAGATTGCCAAGCATGGTATCCGGAATTCGCTCCTGCTGGC 1178702
Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572
||| ||||| || |||||||| || ||||| |||| || || || | || || || ||
Sbjct 1178703 ACCGATGCCGACCGCCTCCACGGCCCAAATTCTGGGCAACAACGAGTCGTTCGAGCCGTA 1178762
Query 76573 CACAACAAACATCTAC 76588
||| | ||| |||||
Sbjct 1178763 CACTTCGAACGTCTAC 1178778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596498071304960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |