Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq8468 104 7e-17
seq9207 87.8 5e-12
seq8981 86.0 2e-11
>seq8468
Length=78740
Score = 104 bits (114), Expect = 7e-17
Identities = 186/266 (70%), Gaps = 8/266 (3%)
Strand=Plus/Plus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || | ||||||||| || ||||| ||| | || || || || |||
Sbjct 38242 TCCATAGCCTTAATGAGACGACGCTGGATGTAACCGGTTTCGGCCGTCTTGACGGCGGTA 38301
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693
|| || | ||| ||||||| ||||| || |||||| | | ||| || ||| || ||
Sbjct 38302 TCGATCAAACCCTCACGACCGCCCATGGCGTGGAAGTAGAACTCGGTAGG-CGTCAGTCC 38360
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750
| | | ||| | || ||||| ||||||| |||||| || |||| || |||| |
Sbjct 38361 GGCCAGGTACGAGTTTTCCACGAAGCCACGCGACTCGGGACCGTAATCATC---CTTGAT 38417
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || |||||||| | || | ||| |||| || ||||| || || ||||||||
Sbjct 38418 GAAATGGGGCAGGGTGCGCTTGCGGAACCCGAATGGAATGCGCTTACCCTCGACGTTCTG 38477
Query 302811 CTGTCCCAGGCACGAAATCATCTGCG 302836
||| |||| ||| | ||| | || ||
Sbjct 38478 CTGACCCACGCAAGCAATAACCTACG 38503
>seq9207
Length=1443628
Score = 87.8 bits (96), Expect = 5e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 155571 ACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGT-CGTCGCT 155629
|||||||| || |||| ||||||||||| || |||||| | || | | || ||
Sbjct 1178267 ACAAACATGTTCAGCGCAATCGACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGA- 1178209
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || || ||||| ||||||||| || | |||||| ||||| | |||| ||||||
Sbjct 1178208 GTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTT 1178149
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746
|| | ||| || ||||||||||| || ||||| || || ||||| | |||
Sbjct 1178148 GCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTG 1178092
>seq8981
Length=1360667
Score = 86.0 bits (94), Expect = 2e-11
Identities = 130/179 (73%), Gaps = 12/179 (7%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| |||||||||||| |||||| |||||||| ||||||||||| || ||||| |||||
Sbjct 1107682 GCTCCGTGTGAAATCTGACAATCGCGCTCCATCTCACCGAAACGCAGGCCACCGTCGCGT 1107741
Query 251545 GCCCTACCCTC----GGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCG-GC 251599
|| | |||||| || ||| ||||| || | ||| |||||| |||| ||
Sbjct 1107742 GCACGACCCTCCATCGGTTGGCGCACGAG-GATCTGCACC---GGACCGC--GAGCACGC 1107795
Query 251600 TA-TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
| || ||| || | ||||| ||||| |||||||||||| | | || |||| |||
Sbjct 1107796 GAGTGAATCTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTAGGTCGGGCCGAGGAA 1107854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471636717296504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |