Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 367 1e-96
seq9325 120 3e-22
seq9240 120 3e-22
seq8899 109 5e-19
seq8738 96.9 3e-15
>seq9207
Length=1443628
Score = 367 bits (406), Expect = 1e-96
Identities = 1220/1865 (65%), Gaps = 57/1865 (3%)
Strand=Plus/Minus
Query 138151 GATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATT 138210
||||| || || ||||||| || || | |||| || || || | |||||| |||||
Sbjct 1179167 GATTTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATG 1179108
Query 138211 CCCGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGT 138269
||||| || | ||||| |||| || |||| | ||| ||||| || || |||| |
Sbjct 1179107 CCCGTCTTCAGGCCCATCTTCC-AGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTT 1179049
Query 138270 CGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAAT 138329
||||| |||| ||||| ||||| || |||||||||||| || || || ||
Sbjct 1179048 CGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGC 1178989
Query 138330 GGCCATGTTAATTAAATTTTT-ACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAA 138388
|||||| || || | |||| || | ||||||||||| |||||||| || || || |
Sbjct 1178988 GGCCATTTTGATGCACGTTTTCACCGAT-ATCTCCCACACCGTCTTGTACAGGTCGCGGA 1178930
Query 138389 TATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTC 138448
| || |||| ||| | || || || |||||| ||||| ||| | ||
Sbjct 1178929 TGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCT 1178870
Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGA 138508
|||| || || | |||| | | | ||| || | | ||||| ||| | |
Sbjct 1178869 TCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCA 1178810
Query 138509 CCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACG 138568
|||| || || || | || || || ||| ||| | ||| ||| | ||||| ||||
Sbjct 1178809 CCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACG 1178750
Query 138569 ATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAG 138628
| |||||||| |||||||| || ||||||| ||||||||||| |||| || || |
Sbjct 1178749 ACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCG 1178690
Query 138629 AATTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685
||||||| | ||| | ||||| || |||||| ||| | ||||| ||||| |
Sbjct 1178689 AATTCCGGATACC---ATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGT 1178633
Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745
| | || | || | |||||| |||||||| | |||||| || | |||| ||| |
Sbjct 1178632 CCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCT 1178573
Query 138746 CGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804
|||||| ||||| ||| | | || |||||||| ||| ||||| || || |||
Sbjct 1178572 CGTACGTTTCGTACGGACC-GTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCA 1178514
Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864
||||| || || || |||||||| || ||| | | || || | || ||||||||
Sbjct 1178513 TAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGA 1178454
Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924
||| | | ||||||| ||||||| || |||||||| | |||| ||| || |||
Sbjct 1178453 TGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGG 1178394
Query 138925 CGCAGATTTG-ACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTG 138981
|||| || | |||||| || || || | || || ||||| | ||||||||||||
Sbjct 1178393 CGCATGTTGGAACGCTT---CGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTG 1178337
Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCA--AAATCGTATGTGC 139039
|| | || ||| ||| | ||| | || | || | | |||| || ||||| |||
Sbjct 1178336 TTCAGGTTGCGCGTGACGATCTT-GGCGACCTCCTTCAGC-TTCACGAAGTCGTACGTG- 1178280
Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACA 139099
|| | || | || ||||| |||| | |||||| || | |||||||
Sbjct 1178279 ---CGAT-------CCGGCCTC-ACAAACATGTTCAGCGCAATCGACGCCAGATTGCACA 1178231
Query 139100 CCGCCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158
|||| | ||||| | | || ||| ||||| || || | |||| || ||||||
Sbjct 1178230 CCGCAATTTCGTCCTTCGACG-AGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTG 1178172
Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218
||||| || | || || || ||||| || ||||| || ||||| ||||| ||||| |||
Sbjct 1178171 ATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTAC 1178112
Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAAT---GAATTTGAACAAGTCCCTAGCTTGT 139275
|| ||| || || || || | ||| || || ||| ||| ||| || |
Sbjct 1178111 GGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAA---CCACAGATCCTGCGCCTTC 1178055
Query 139276 ATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCA 139335
| || || | | | | | || |||||| ||| || || || |||
Sbjct 1178054 ACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCG 1177995
Query 139336 CCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTC 139395
|| | | || || || || | || | || |||||||| || ||| | |||||
Sbjct 1177994 CCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTC 1177935
Query 139396 GCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCC 139455
|||| || ||| |||||||||||||||| | ||||| ||| | | || || |||||
Sbjct 1177934 GCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCA 1177875
Query 139456 TTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGC 139515
|| ||| || |||| |||| | || || ||||| || || | |||
Sbjct 1177874 CGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGC 1177815
Query 139516 CATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGT 139572
|| || || || |||||||| | || || || ||||| || || || || |
Sbjct 1177814 CACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATAC 1177755
Query 139573 CGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTG 139632
|| | | || ||| | || |||| |||||| ||| ||| | | | ||||| |||
Sbjct 1177754 CGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTG 1177695
Query 139633 CTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGC 139690
| || | | || || | || |||| | || || || | || || || |||
Sbjct 1177694 C-CCGCAATGTAC-GTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGG 1177637
Query 139691 CAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCG 139749
| | ||||| || | |||| | || | | || ||||| || || || ||||||
Sbjct 1177636 CGGACTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCG 1177578
Query 139750 TCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAAC 139809
||| |||||| | |||||||| ||||| ||||| || | | |||| | || ||||||
Sbjct 1177577 TCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAAC 1177518
Query 139810 AGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCG 139869
| || || |||||||| || | | | ||| | ||| | |||||||||||| ||
Sbjct 1177517 ATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGC- 1177459
Query 139870 CTCA-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCG 139928
| || | || ||| |||||||| |||| | || ||||||||||| || || ||
Sbjct 1177458 CGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCG 1177399
Query 139929 TTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCA 139986
|||| | | | ||||| ||| || ||| || ||||| || || || ||| |||||
Sbjct 1177398 TTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGT--TCGAGCGTTTTGAAGCCA 1177341
Query 139987 AAGTA 139991
|| ||
Sbjct 1177340 AAATA 1177336
>seq9325
Length=2359367
Score = 120 bits (132), Expect = 3e-22
Identities = 178/250 (71%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || ||||| || || || || || || ||||| || || | |
Sbjct 260904 ATGCAGATTTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTCGAGGTCGAGCCTTCG 260963
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 260964 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 261023
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||||||||||| || || || ||||||||||| | | |||| || || |||
Sbjct 261024 CAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAAC 261083
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
|| || ||||||||||| || |||||||| | || | ||||||| | |||||| ||
Sbjct 261084 ATCCAGAAGGAATCGACCCTTCACTTGGTTCTTCGTCTTCGCGGAG--GAAACTGAATCA 261141
Query 24944 ACGAAAGACG 24953
| |||||||
Sbjct 261142 A-AAAAGACG 261150
>seq9240
Length=943838
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| || || ||||| || ||||| || || || || || |
Sbjct 630584 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 630525
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || |||||||| ||||| || || || || || || ||
Sbjct 630524 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 630465
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||| ||||| || |||||||||||| | | |||| || || ||
Sbjct 630464 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTACAA 630405
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||||| ||||| ||||| || || ||||| ||||
Sbjct 630404 CATTCAGAAGGAGTCGACCCTCCATCTGGTGCTGCG 630369
>seq8899
Length=3132144
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || || || || || | |
Sbjct 384680 GATGCAGATTTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCGTC 384621
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || || || || || || |||||||| || || |||||
Sbjct 384620 GGACACGATCGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGAATTCCGCCAGATCA 384561
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| ||| ||||||| ||||| || |||||||||||| | | | || || || ||
Sbjct 384560 ACAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCGGACTACAA 384501
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| ||||| || ||| |||| ||||| | || || ||
Sbjct 384500 CATTCAGAAGGAGTCGACCCTTCACCTGGTTCTGCGACTTCGTGGTGG 384453
>seq8738
Length=1280009
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || || || || || ||| | || || || | |
Sbjct 1177662 GATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTGGAGCCTTC 1177603
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || ||||| || ||||| ||||| |||||
Sbjct 1177602 GGACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCA 1177543
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||||||||| || |||||||| ||| | | | || ||||| ||
Sbjct 1177542 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCGGATTACAA 1177483
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || || |||| | || ||||||| ||
Sbjct 1177482 CATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGG 1177435
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || || || || || || ||| | || || || | |
Sbjct 1177433 ATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTCG 1177374
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || ||||| ||||| |||||
Sbjct 1177373 GACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCAG 1177314
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||||||||| || |||||||| ||| | | | | || ||||| |||
Sbjct 1177313 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACAAC 1177254
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || || |||| | || ||||||| ||
Sbjct 1177253 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGG 1177207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449843657277760
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