Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9240 152 3e-32 seq8899 140 2e-28 seq8738 111 1e-19 seq9325 104 2e-17 >seq9240 Length=943838 Score = 152 bits (168), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | ||| ||||||||||||||| ||||| || || |||| |||| Sbjct 630371 CAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATC 630430 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || |||||||| |||| | ||||||||||| Sbjct 630431 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 630490 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || || |||||| |||| ||| ||| Sbjct 630491 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| || || ||||||||||| Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583 >seq8899 Length=3132144 Score = 140 bits (154), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||||| ||| ||||||||||||||| |||||||| || | || |||| Sbjct 384467 CAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCATC 384526 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || || || ||| |||| | || ||||| || Sbjct 384527 CTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATC 384586 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| || || || || |||| || | |||||| |||| ||| ||| Sbjct 384587 CTGAATTTTCGCCTTCAC--ATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATG 384644 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || || || |||||||| Sbjct 384645 GTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq8738 Length=1280009 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | || ||||||||| ||||| || ||||| || | || |||| Sbjct 1177450 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCT 1177509 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||| || || ||||| ||| | || | ||||||||||| Sbjct 1177510 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177569 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || |||| || | ||| || || | || |||| Sbjct 1177570 TGAATCTTGGCCTTCAC--ATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGG 1177627 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||| |||||||| || || |||||||| Sbjct 1177628 TCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | || ||||||||| ||||| || ||||| ||| | || |||| Sbjct 1177222 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCT 1177281 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||| || || ||||| ||| | || | ||||||||||| Sbjct 1177282 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177341 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || |||| || | ||| || || | || |||| Sbjct 1177342 TGAATCTTGGCCTTCAC--ATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGG 1177399 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || |||||||| || || || ||||| Sbjct 1177400 TCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433 >seq9325 Length=2359367 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| | | | || |||| ||||| ||| |||||||| ||||| ||||| Sbjct 261133 TTTCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCG 261074 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || | || | || ||||| |||||||| |||||||||| || ||||| ||| | Sbjct 261073 GACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGG 261014 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||||||||| | || || |||||| | || | || | |||| Sbjct 261013 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCG 260954 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || |||||||| || || || ||||| || || |||||||| Sbjct 260953 ACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325654725697448