Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq9240 152 3e-32
seq8899 140 2e-28
seq8738 111 1e-19
seq9325 104 2e-17
>seq9240
Length=943838
Score = 152 bits (168), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| ||||| || | ||| ||||||||||||||| ||||| || || |||| ||||
Sbjct 630371 CAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATC 630430
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| |||||||||||||| || |||||||| |||| | |||||||||||
Sbjct 630431 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 630490
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || || |||||| |||| ||| |||
Sbjct 630491 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || |||||||||||
Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq8899
Length=3132144
Score = 140 bits (154), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||||| ||| ||||||||||||||| |||||||| || | || ||||
Sbjct 384467 CAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCATC 384526
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| |||||||||||||| || || || ||| |||| | || ||||| ||
Sbjct 384527 CTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATC 384586
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| ||||| || || || || |||| || | |||||| |||| ||| |||
Sbjct 384587 CTGAATTTTCGCCTTCAC--ATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATG 384644
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || |||||||| || || || ||||||||
Sbjct 384645 GTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq8738
Length=1280009
Score = 111 bits (122), Expect = 1e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | || ||||||||| ||||| || ||||| || | || ||||
Sbjct 1177450 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCT 1177509
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||| ||||| || || ||||| ||| | || | |||||||||||
Sbjct 1177510 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177569
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || |||| || | ||| || || | || ||||
Sbjct 1177570 TGAATCTTGGCCTTCAC--ATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGG 1177627
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||||| |||||||| || || ||||||||
Sbjct 1177628 TCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
Score = 105 bits (116), Expect = 4e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | || ||||||||| ||||| || ||||| ||| | || ||||
Sbjct 1177222 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCT 1177281
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||| ||||| || || ||||| ||| | || | |||||||||||
Sbjct 1177282 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177341
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || |||| || | ||| || || | || ||||
Sbjct 1177342 TGAATCTTGGCCTTCAC--ATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGG 1177399
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || |||||||| || || || |||||
Sbjct 1177400 TCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433
>seq9325
Length=2359367
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|||||||| | | | || |||| ||||| ||| |||||||| ||||| |||||
Sbjct 261133 TTTCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCG 261074
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| || | || | || ||||| |||||||| |||||||||| || ||||| ||| |
Sbjct 261073 GACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGG 261014
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||||||||| | || || |||||| | || | || | ||||
Sbjct 261013 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCG 260954
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || |||||||| || || || ||||| || || ||||||||
Sbjct 260953 ACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325654725697448
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