Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq9168 127 2e-23 seq2888 89.7 4e-12 >seq9168 Length=636294 Score = 127 bits (140), Expect = 2e-23 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 637124 TTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAA 637183 |||| |||| || || |||||| | |||||||||||||| |||||||| ||||||||| Sbjct 510434 TTGTTGATTTCTCATCACCAAATGTGGCTAAAGAAATGCACGTTGGACATCTAAGATCAA 510375 Query 637184 CTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTA 637243 | ||||| ||||| |||||||| | | | || | ||||||||||| | || | Sbjct 510374 CAATTATCGGTGACTCTATTTGCCGTTTCCTCGAGTTTCTCGGACACGATGTGTTGCGCA 510315 Query 637244 TTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 | ||||| | ||||| |||||||| || || |||||||| |||||| || Sbjct 510314 TCAATCACATTGGTGACTGGGGAACACAGTTTGGTATGTTGATTGCTCAT 510265 >seq2888 Length=149780 Score = 89.7 bits (98), Expect = 4e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 282680 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCT 282739 || || || || || || || || || || || | || | || | ||||| ||||| Sbjct 92619 CGCTTGGCGTCGAAGATTGTGTTCGTCGGGTTCATGGCGACCTGGTTCTTGGCGGCATCG 92678 Query 282740 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 || |||||| | || || || || || | ||||| || || || || || || || || Sbjct 92679 CCGATCAGACGCTCCGTATCGGTGAAGGCCACATAGGACGGCGTCGTACGGTTGCCCTGG 92738 Query 282800 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 282859 ||||| |||||||||||||| || || | || |||| || || || ||| | || ||| Sbjct 92739 TCATTGGCAATAATTTCAACCTTTCCGTGCTGGAATACTCCAACGCAGCTATAGGTGGTT 92798 Query 282860 CCTAAATCAATACC 282873 || | ||| ||||| Sbjct 92799 CCGAGATCGATACC 92812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740159473335792