Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq9239 114 2e-20
>seq9239
Length=1433044
Score = 114 bits (126), Expect = 2e-20
Identities = 216/315 (69%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054
|| |||| ||| |||| || ||| ||| ||||| || | || | |||||| |||
Sbjct 683558 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACGCCGCCCAGCTGCAGATGGTGAAG 683499
Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114
|| || || |||||| | || | || ||||||||||| || |||||||| || ||||
Sbjct 683498 GAGGGCAAGATGCATGGATTCCTGCGGATGTACTGGGCGAAGAAGATACTCGAGTGGAGC 683439
Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173
| ||| || || || || | ||| | ||||| ||||| || ||| |||||
Sbjct 683438 AAAACGCCCGAGGAAGCGCTCGAGGCGGCG-ATCTACCTGAACGATCGTTACAGCCTAGA 683380
Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233
|| || || ||||| ||||| ||||| |||||||| || ||| | ||||||
Sbjct 683379 TGGGCGCGACCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCTGGAATTCACGATCA 683320
Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAA 183293
| ||||| ||| | || || || || |||||||| ||||| || || ||| |||
Sbjct 683319 GGGATGGAAGGAACGGGACATCTTCGGTAAAATAAGATACATGAACTACGAAGGTTGTAA 683260
Query 183294 GAAGAAATTTGATGT 183308
| ||| || |||||
Sbjct 683259 AAGGAAGTTCGATGT 683245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903302880997120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |