Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq9239 114 2e-20 >seq9239 Length=1433044 Score = 114 bits (126), Expect = 2e-20 Identities = 216/315 (69%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || |||| ||| |||| || ||| ||| ||||| || | || | |||||| ||| Sbjct 683558 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACGCCGCCCAGCTGCAGATGGTGAAG 683499 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || || |||||| | || | || ||||||||||| || |||||||| || |||| Sbjct 683498 GAGGGCAAGATGCATGGATTCCTGCGGATGTACTGGGCGAAGAAGATACTCGAGTGGAGC 683439 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || || || || | ||| | ||||| ||||| || ||| ||||| Sbjct 683438 AAAACGCCCGAGGAAGCGCTCGAGGCGGCG-ATCTACCTGAACGATCGTTACAGCCTAGA 683380 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233 || || || ||||| ||||| ||||| |||||||| || ||| | |||||| Sbjct 683379 TGGGCGCGACCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCTGGAATTCACGATCA 683320 Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAA 183293 | ||||| ||| | || || || || |||||||| ||||| || || ||| ||| Sbjct 683319 GGGATGGAAGGAACGGGACATCTTCGGTAAAATAAGATACATGAACTACGAAGGTTGTAA 683260 Query 183294 GAAGAAATTTGATGT 183308 | ||| || ||||| Sbjct 683259 AAGGAAGTTCGATGT 683245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903302880997120