Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 618 4e-172
seq9254 134 1e-26
seq9240 132 5e-26
seq8738 114 1e-20
seq9325 113 4e-20
seq8899 104 2e-17
>seq9207
Length=1443628
Score = 618 bits (684), Expect = 4e-172
Identities = 1254/1835 (68%), Gaps = 45/1835 (2%)
Strand=Plus/Minus
Query 147943 CGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGT 148002
||| ||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||
Sbjct 1179132 CGGCTTG-GTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGT 1179074
Query 148003 GCACCGACGACATGAGCGTG---TACGTCGGGTGCGGCACAAACAGATTAAACGACTGGC 148059
| | ||||| || || || || |||| | | ||| | || |||||||||
Sbjct 1179073 GAATCGACGTCA---GCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGG 1179017
Query 148060 TCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTT-ATCTTCATC 148118
||| || |||||||| || ||||| |||||||||| ||| || ||| | | |||
Sbjct 1179016 ACTGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCA-CGTTTTCACCGATATC 1178958
Query 148119 TCCCAGGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177
||||| ||||||||||||| ||| ||| || | ||||| | ||||| ||||| |
Sbjct 1178957 TCCCACACCGTCTTGTACAGGTCGCG-GATGTGCTGCGGAATTTCCTCGATCCGCTGTAT 1178899
Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237
||| ||| |||||||| || || || ||| ||||| | ||| ||| ||| |
Sbjct 1178898 CGAACCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGT 1178839
Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297
||| || | | ||||| || || |||||||| |||||||| | |||||||||||
Sbjct 1178838 CAGATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATT 1178779
Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| ||||| || |||| || ||||||||||||||||||| ||| || || || |
Sbjct 1178778 GTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGA 1178719
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
|| || ||||| || | ||| ||||| || || | ||| | || || ||
Sbjct 1178718 GGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTC 1178659
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
|||||| | ||||||| ||| || || || ||| | ||||||||||||||||||
Sbjct 1178658 CTTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAG 1178599
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT-GCGCCGCCGCCA 148536
|| || ||| | || | ||||||||||| |||||| |||| ||| || ||||
Sbjct 1178598 GATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCG-GGCGGCCA 1178540
Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596
|| ||||| ||||| || ||||| ||||| || ||||| || ||| ||| |||
Sbjct 1178539 ACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCT 1178480
Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656
|| ||| ||||||||||| |||| | | ||||| ||||| | ||||
Sbjct 1178479 TTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCT 1178420
Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGA 148715
| ||||| | || || || ||||| |||||||| | ||| ||| | | |||
Sbjct 1178419 GCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGC-CTCCGGCACCGGG 1178361
Query 148716 TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC-G 148774
|||| |||| ||||||||| |||| || |||||| || | ||| | | || |
Sbjct 1178360 TAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGA-CCTCCTT 1178302
Query 148775 CAGCAATTCA--AAATCGTACTTGTCAT-----CTACGATGCATCGGTTCACGGCGATAG 148827
|||| |||| || |||||| || || || | ||| ||||| || || |
Sbjct 1178301 CAGC--TTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACAT--GTTCAGCGCAATCG 1178246
Query 148828 AGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACA 148887
| || ||||||||||| || | || ||| | |||||| |||||||| | |||||
Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACA 1178186
Query 148888 GATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCT 148947
| || ||| |||||| ||||||||||| || |||||||| | ||||||||| ||||
Sbjct 1178185 GGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCT 1178126
Query 148948 TGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCA 149004
|||| ||||||||||| |||| || || ||||||| || | || ||||| ||
Sbjct 1178125 TGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACC---ACA 1178069
Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCC 149064
| |||||||| ||| ||| | | | ||||| |||| |||||| || |||||||
Sbjct 1178068 GATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCC 1178009
Query 149065 GCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCG 149124
|||| ||| | ||||| | | || || |||||||| | |||||| ||||| ||
Sbjct 1178008 GCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGC 1177949
Query 149125 ACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACA 149184
||||| ||| ||| | ||| |||||||| |||||||| |||||||| |||||||| |
Sbjct 1177948 TCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGA 1177889
Query 149185 TGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGA 149244
| ||| ||||| | || || ||| |||| ||| | ||| | |
Sbjct 1177888 ACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAA 1177829
Query 149245 ATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGC 149301
| | || | ||||||||||| | ||| | |||| ||| || ||| |||||||
Sbjct 1177828 ACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGC 1177769
Query 149302 CCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGG 149361
||||||| || | || || ||||||| | || || | ||| || | | || |||
Sbjct 1177768 CCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGG 1177709
Query 149362 CAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGC 149421
| ||||| || |||| | || ||| || | ||||||||| | |
Sbjct 1177708 AGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCAGAC 1177649
Query 149422 CGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCT 149481
| ||||| ||| || |||| ||||| ||||| | ||||| ||| || ||||
Sbjct 1177648 CAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCT 1177589
Query 149482 CGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGC 149541
|||| |||||| | ||| || || |||||||| || ||| ||| || |||||
Sbjct 1177588 CGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGG 1177529
Query 149542 CGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACG 149601
| ||||| |||||||| || |||||| ||||| ||| || | || | |||||
Sbjct 1177528 CCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACG 1177469
Query 149602 ACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCAT 149659
|||| || ||| || ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct 1177468 TTTCGATTGC-CGC-ATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCAT 1177411
Query 149660 ATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG--CCGTTTTCTAGT 149717
||||||||||| || | | ||| || || |||| |||| ||| ||| ||
Sbjct 1177410 GTGCTGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCG--TTCGAGC 1177353
Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
|| ||| ||||||| || ||||| ||||||||||
Sbjct 1177352 GTTTTGAAGCCAAAATAATTGTACCCAAAGTCGCG 1177318
>seq9254
Length=4138565
Score = 134 bits (148), Expect = 1e-26
Identities = 280/412 (68%), Gaps = 5/412 (1%)
Strand=Plus/Plus
Query 120453 GCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGC 120512
|||||||| || ||||| ||||| || || ||||| ||||||| |||| |
Sbjct 2197041 GCCCAACTCGACCAGCAGCCGGTCGGCAACGAACTCGATGTACTGCGACATCAGGTCACA 2197100
Query 120513 GTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCAC 120572
|||||||||||||| | || |||| |||| || | ||||||| || || ||||
Sbjct 2197101 GTTCATGCCCAGCATATCGACTGGCAGCGCCTTGGTAAGGAACTCCTGTTCGATTACCAC 2197160
Query 120573 CGCCTCCTTGAACATGGCGAG-CATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC 120631
||| || | ||| | || || | | || | | ||| || | | | ||
Sbjct 2197161 CGCATCGCGAATGATG-CTAGTCACACGCTCGCGCGTCGGCTTTTGAACCAGGTA--TTT 2197217
Query 120632 GGTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGC 120691
| || ||||| |||||||| ||||| ||||||||| ||||| |||||||||||
Sbjct 2197218 GAACATA-AGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTTCG 2197276
Query 120692 TAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGC 120751
|| |||| ||| ||||| | ||| | |||| | |||| || |||||||||||||
Sbjct 2197277 AGAAGGTCAAGCCTGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCTGC 2197336
Query 120752 CCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCG 120811
| ||||| | ||||| ||| |||||| ||||| | |||||| | || | ||
Sbjct 2197337 CGCTGAAGAAAATTCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAGTTGGCTT 2197396
Query 120812 TCTTGCTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
||||||| ||||| |||| ||||| || ||||| || ||| |||||
Sbjct 2197397 TCTTGCTCGAAATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACACACGG 2197448
>seq9240
Length=943838
Score = 132 bits (146), Expect = 5e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| ||| || |||| | | | ||||| ||||
Sbjct 630380 ATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCA-TCCTCCAGCT 630438
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || ||||||||||| || |||||||| |||||||| |||||
Sbjct 630439 GCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCT 630498
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || |
Sbjct 630499 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 630558
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| ||||| ||||||||
Sbjct 630559 TGAGGGTTTTGACGAAGATCTGCAT 630583
>seq8738
Length=1280009
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || |||||||| | | | | ||| || || ||||||||||
Sbjct 1177465 GTAGACTCCTTCTGGATGTTGTAATC--CGAAAGAGTACGGCCATCTTCCAGCTGCTTGC 1177522
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| |||||||| || |||||||| || |||||||| ||||| ||
Sbjct 1177523 CGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCT 1177582
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| | |||||||| || | |||| ||| || || || || |
Sbjct 1177583 TCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGG 1177642
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 1177643 TCTTGACGAAAATCTGCAT 1177661
Score = 111 bits (122), Expect = 2e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || |||||||| | | | | ||| || || ||||||||||
Sbjct 1177237 GTAGACTCCTTCTGGATGTTGTAATC--CGAAAGGGTACGGCCATCTTCCAGCTGCTTGC 1177294
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| |||||||| || |||||||| || |||||||| ||||| ||
Sbjct 1177295 CGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCT 1177354
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| | ||||| || || | |||| ||| || || ||||| |
Sbjct 1177355 TCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGG 1177414
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || |||||||| |||||
Sbjct 1177415 TCTTGACGAAAATTTGCAT 1177433
>seq9325
Length=2359367
Score = 113 bits (124), Expect = 4e-20
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| || || ||||| || ||||| ||| || || ||| |||||| |
Sbjct 261109 AAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGT--ACGTCCGTCCTCCA 261052
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || ||| | || | |||||||| || || || || || |||||||| ||
Sbjct 261051 GCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGA 260992
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | ||| | ||||| | ||||| || |||| |||| ||| ||||
Sbjct 260991 TCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTTGC 260932
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || ||||||||||||||
Sbjct 260931 CAGTCAGCGTCTTCACGAAAATCTGCAT 260904
>seq8899
Length=3132144
Score = 104 bits (114), Expect = 2e-17
Identities = 146/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| || | ||| | | | ||||| |||||||| |
Sbjct 384482 GGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCA-TCCTCCAGCTGCTTAC 384540
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
| ||| | || || ||||| || || || || || |||||||| || ||| ||| ||
Sbjct 384541 CGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATCC-TGAATTTTCGCC 384599
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|| | | ||| | |||||| | ||||| || || | ||||| ||| ||||| || ||
Sbjct 384600 TTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGG 384659
Query 133641 GTTTTTACGAAAATCTGCAT 133660
||||| ||||||||||||||
Sbjct 384660 GTTTTCACGAAAATCTGCAT 384679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483362837846080
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