Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 105 2e-17
seq8899 102 2e-16
seq9240 84.2 5e-11
>seq8738
Length=1280009
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || ||||| || ||||| ||||| ||||| ||| |||
Sbjct 1177658 CAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTGGAGCCTTCGGAC 1177599
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || ||||| || || ||
Sbjct 1177598 ACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCAGCAG 1177539
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| ||||| |||||| |||||||||| | ||| | | ||||||||| ||
Sbjct 1177538 CGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCGGATTACAACATC 1177479
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||||||||| || || ||
Sbjct 1177478 CAGAAGGAGTCTACTCTCCATCTGGT 1177453
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || ||||| || ||||| ||||| || || ||| ||||| | ||
Sbjct 1177419 CAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTCGGACACGATTGAGAA 1177360
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || ||||| || || || | || |||||
Sbjct 1177359 TGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCAGCAGCGTCTCATCTT 1177300
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| |||||| |||||||||| | || | | ||||||||| ||||||| |||||
Sbjct 1177299 TGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACAACATCCAGAAGGAGTC 1177240
Query 206364 TACTCTTCACCTTGT 206378
|||||| || || ||
Sbjct 1177239 TACTCTCCATCTGGT 1177225
>seq8899
Length=3132144
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || || || ||||| | || || || || ||||| ||||
Sbjct 384664 AAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCGTCGGACACGATCGAGAAT 384605
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || ||||| || || ||||||||| ||| || || | || ||||||
Sbjct 384604 GTGAAGGCGAAAATTCAGGATAAGGAAGGAATTCCGCCAGATCAACAGCGTCTGATCTTC 384545
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||| ||||| | || | | || |||||| | ||||| |||||
Sbjct 384544 GCCGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCGGACTACAACATTCAGAAGGAGTCG 384485
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||||| ||| || |||||||
Sbjct 384484 ACCCTTCACCTGGTTCTGCGACTTCG 384459
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| || ||| |||||||| || ||||| ||||| | || ||||| | | ||
Sbjct 384459 CGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTA 384518
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||| ||||||||||| ||||||||||| || || ||||||
Sbjct 384519 CGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGA 384563
>seq9240
Length=943838
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || || | || || || || ||
Sbjct 630580 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCGGAT 630521
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || ||||||| ||
Sbjct 630520 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 630461
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| |||||| | || || |||| |||||| |
Sbjct 630460 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTACAACATT 630401
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || || || ||
Sbjct 630400 CAGAAGGAGTCGACCCTCCATCTGGT 630375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181675557178232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |