Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 452 4e-122
seq8899 118 1e-21
seq8738 93.3 4e-14
seq9240 89.7 5e-13
>seq9207
Length=1443628
Score = 452 bits (500), Expect = 4e-122
Identities = 1233/1862 (66%), Gaps = 56/1862 (3%)
Strand=Plus/Minus
Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633
|| || || ||||||| ||| ||||||||||| || ||||| |||| ||| ||
Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCC-CATCTTCCAGCCGTAGAA 1179076
Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693
||||||||| |||| || |||| |||| || |||||| || || ||||| |||
Sbjct 1179075 GTGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGA 1179016
Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTC-ATT 146751
||||| ||||| || ||||| || ||||| | || || |||||| | ||
Sbjct 1179015 CTGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCA--CGTTTTCACCGATATC 1178958
Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811
||||| | || |||||||| | | | | ||||| | || || || ||
Sbjct 1178957 TCCCACACCGTCTTGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATC 1178898
Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAAAGGTTTAGTTTAAT 146870
|| || |||||||||| || || ||| | || ||| | ||| |||| |
Sbjct 1178897 GAACCGTTGTGCGCAAGGATT-TGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGT 1178839
Query 146871 GAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAG 146930
|| || | | | || || |||||||| || |||||||||| |||||| || |
Sbjct 1178838 CAGATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATT 1178779
Query 146931 ATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGT 146990
|| || || |||| | ||||| || ||||| || ||||| | |||||||||||||
Sbjct 1178778 GTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGA 1178719
Query 146991 TGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGTTG 147048
||||| ||||| |||| || | ||||| || | ||| | || || || ||
Sbjct 1178718 GGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCAT--GCTTGGCAATCTTT 1178661
Query 147049 TCCTTCAAAGTTTG--CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACT 147106
||||||| | | | ||||| ||||| || || ||| | ||||||||||||||
Sbjct 1178660 TCCTTCA--GCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACT 1178603
Query 147107 GGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG 147166
| || | ||| || | |||| ||| || |||| ||| |||||||| |
Sbjct 1178602 GCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGG 1178543
Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226
|||| |||||||| ||||| || || |||||||| ||||| || ||| || | ||| |
Sbjct 1178542 CCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA 1178483
Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286
| ||||| || || ||||| || |||| || | || |||||||||| |
Sbjct 1178482 GCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTC 1178423
Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346
|||| | |||| ||||||||||| || |||| |||||||| || | |
Sbjct 1178422 CCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCG 1178363
Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406
| |||| |||| || || || ||||| ||||| ||| || | || | | |
Sbjct 1178362 GGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCT 1178303
Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAG 147466
| || ||| |||| || || || | || | | | | ||| ||||| || || |
Sbjct 1178302 TCAGCTTCACGAAGTCGTACGTGCGATCCG-GCCTCACAAACAT--GTTCAGCGCAATCG 1178246
Query 147467 ACGCCAGATTGCAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGC 147521
||||||||||||| || || |||| ||||| || ||||| ||||| || |
Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTC-CTTCGACGA----GTACTCGACGATCTCCGT 1178191
Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581
||||||||| ||| || || |||| || ||||| ||||| ||||| ||||||||
Sbjct 1178190 GCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGC 1178131
Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AACCT 147638
|| ||| ||||||||||||| |||| |||||||| |||| || | ||| ||||
Sbjct 1178130 ATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCA 1178071
Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696
||| |||||||| |||| || | ||| | || || || || ||||| | | |
Sbjct 1178070 ---CAGATCCTGCGCCTTCACCTGCCG--GATGAACCGACCTTCCTTCTCGTAGCCCGTG 1178016
Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756
|||| |||||||||||| ||||| | | || | || ||||| || | |||||||||
Sbjct 1178015 TACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACAC 1177956
Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816
|| || |||||| |||| ||| | || || ||| |||||||||||||||||||||
Sbjct 1177955 ATAAGGCTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGC 1177896
Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGC 147876
||||| | | || ||||| | ||||| ||| |||| |||| || ||
Sbjct 1177895 GCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGA 1177836
Query 147877 ACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC--- 147933
| | | | ||| | ||||| || || | ||||| ||| | |||||| ||||
Sbjct 1177835 AACTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTG 1177776
Query 147934 TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGG 147993
|| ||||||||||| |||| || || ||||||| | || |||| ||| || |||
Sbjct 1177775 TTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAAC 1177716
Query 147994 CCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACG 148053
||| | | | ||||| ||| || | | || || || | |||||||
Sbjct 1177715 CCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACG 1177656
Query 148054 TTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAG 148113
|| | |||||||| ||| || |||| || || ||||| | || || |||
Sbjct 1177655 TTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAA 1177596
Query 148114 ATGCCGTCGATGCTGTCGTTTTTGACGCC--AAGCAAAAAACACGAACACATTTGCGGAA 148171
|| || ||||| |||||| | ||| | || | ||| || || ||| ||| ||
Sbjct 1177595 ATTCCCTCGATACTGTCG--TCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCC 1177538
Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231
| |||| |||||| || | ||| || ||||||||||| | | ||| |
Sbjct 1177537 GCTGCGTGGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAA----GTATCGCTCCGAA 1177482
Query 148232 TGCGA----TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACG 148287
|| | ||||| || || || | |||||||| |||||||| || || | || |||
Sbjct 1177481 AGCAAATTGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACG 1177422
Query 148288 CGCATGAGCATGTGCTGTGGTCGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCC 148346
||||| ||||||||||| ||||||||| | | |||| |||||||| || || ||
Sbjct 1177421 CGCATCAGCATGTGCTGCGGTCGTTCGACGATCTTG-CCCTTGATCTTCAGCAGGTAGGA 1177363
Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
|||||| |||||| | ||||| || ||||| |||| || | ||||| ||||||
Sbjct 1177362 CCGTTCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGC 1177303
Query 148407 CG 148408
||
Sbjct 1177302 CG 1177301
>seq8899
Length=3132144
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||| || | | | ||||| || |||||||||||||| | ||||| |
Sbjct 384465 CGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCA 384524
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| ||||||| |||| ||||||||||||||||| || || ||||| |||
Sbjct 384525 TCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTA 384584
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| |||| | || | || || | |||||| || || | || |
Sbjct 384585 TCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATG 384644
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| || ||||| | ||||||||||||
Sbjct 384645 GTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq8738
Length=1280009
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||| || | |||||| |||||| ||||| || |||| |
Sbjct 1177240 GACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCA 1177299
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||||||||| || || || || || ||| || ||||
Sbjct 1177300 AAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACA 1177359
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || || | ||| | || || |||||||| || ||
Sbjct 1177360 TTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTG 1177419
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 1177420 ACGAAAATTTGCAT 1177433
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||| || | ||||| |||||| ||||| || |||| |
Sbjct 1177468 GACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCA 1177527
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||||||||| || || || || || ||| || ||||
Sbjct 1177528 AAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACA 1177587
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| || | ||| | || || || || || || ||
Sbjct 1177588 TTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTG 1177647
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 1177648 ACGAAAATCTGCAT 1177661
>seq9240
Length=943838
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||||| |||| ||| | | | ||||| || ||||||||||||||| || ||
Sbjct 630362 ACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 630421
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| || |||| |||| |||||||| || || || || |||||
Sbjct 630422 GCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCC 630481
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || |||| | || | ||||| | ||||| || || |
Sbjct 630482 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAG 630541
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || ||||| || || ||||| | ||| ||||||||
Sbjct 630542 GGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476554054317120
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