Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq9207 452 4e-122 seq8899 118 1e-21 seq8738 93.3 4e-14 seq9240 89.7 5e-13 >seq9207 Length=1443628 Score = 452 bits (500), Expect = 4e-122 Identities = 1233/1862 (66%), Gaps = 56/1862 (3%) Strand=Plus/Minus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633 || || || ||||||| ||| ||||||||||| || ||||| |||| ||| || Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCC-CATCTTCCAGCCGTAGAA 1179076 Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693 ||||||||| |||| || |||| |||| || |||||| || || ||||| ||| Sbjct 1179075 GTGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGA 1179016 Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTC-ATT 146751 ||||| ||||| || ||||| || ||||| | || || |||||| | || Sbjct 1179015 CTGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCA--CGTTTTCACCGATATC 1178958 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 ||||| | || |||||||| | | | | ||||| | || || || || Sbjct 1178957 TCCCACACCGTCTTGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATC 1178898 Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAAAGGTTTAGTTTAAT 146870 || || |||||||||| || || ||| | || ||| | ||| |||| | Sbjct 1178897 GAACCGTTGTGCGCAAGGATT-TGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGT 1178839 Query 146871 GAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAG 146930 || || | | | || || |||||||| || |||||||||| |||||| || | Sbjct 1178838 CAGATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATT 1178779 Query 146931 ATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGT 146990 || || || |||| | ||||| || ||||| || ||||| | ||||||||||||| Sbjct 1178778 GTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGA 1178719 Query 146991 TGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGTTG 147048 ||||| ||||| |||| || | ||||| || | ||| | || || || || Sbjct 1178718 GGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCAT--GCTTGGCAATCTTT 1178661 Query 147049 TCCTTCAAAGTTTG--CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACT 147106 ||||||| | | | ||||| ||||| || || ||| | |||||||||||||| Sbjct 1178660 TCCTTCA--GCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACT 1178603 Query 147107 GGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG 147166 | || | ||| || | |||| ||| || |||| ||| |||||||| | Sbjct 1178602 GCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGG 1178543 Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226 |||| |||||||| ||||| || || |||||||| ||||| || ||| || | ||| | Sbjct 1178542 CCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA 1178483 Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286 | ||||| || || ||||| || |||| || | || |||||||||| | Sbjct 1178482 GCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTC 1178423 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346 |||| | |||| ||||||||||| || |||| |||||||| || | | Sbjct 1178422 CCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCG 1178363 Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406 | |||| |||| || || || ||||| ||||| ||| || | || | | | Sbjct 1178362 GGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCT 1178303 Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAG 147466 | || ||| |||| || || || | || | | | | ||| ||||| || || | Sbjct 1178302 TCAGCTTCACGAAGTCGTACGTGCGATCCG-GCCTCACAAACAT--GTTCAGCGCAATCG 1178246 Query 147467 ACGCCAGATTGCAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGC 147521 ||||||||||||| || || |||| ||||| || ||||| ||||| || | Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTC-CTTCGACGA----GTACTCGACGATCTCCGT 1178191 Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581 ||||||||| ||| || || |||| || ||||| ||||| ||||| |||||||| Sbjct 1178190 GCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGC 1178131 Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AACCT 147638 || ||| ||||||||||||| |||| |||||||| |||| || | ||| |||| Sbjct 1178130 ATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCA 1178071 Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696 ||| |||||||| |||| || | ||| | || || || || ||||| | | | Sbjct 1178070 ---CAGATCCTGCGCCTTCACCTGCCG--GATGAACCGACCTTCCTTCTCGTAGCCCGTG 1178016 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 |||| |||||||||||| ||||| | | || | || ||||| || | ||||||||| Sbjct 1178015 TACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACAC 1177956 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 || || |||||| |||| ||| | || || ||| ||||||||||||||||||||| Sbjct 1177955 ATAAGGCTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGC 1177896 Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGC 147876 ||||| | | || ||||| | ||||| ||| |||| |||| || || Sbjct 1177895 GCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGA 1177836 Query 147877 ACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC--- 147933 | | | | ||| | ||||| || || | ||||| ||| | |||||| |||| Sbjct 1177835 AACTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTG 1177776 Query 147934 TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGG 147993 || ||||||||||| |||| || || ||||||| | || |||| ||| || ||| Sbjct 1177775 TTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAAC 1177716 Query 147994 CCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACG 148053 ||| | | | ||||| ||| || | | || || || | ||||||| Sbjct 1177715 CCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACG 1177656 Query 148054 TTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAG 148113 || | |||||||| ||| || |||| || || ||||| | || || ||| Sbjct 1177655 TTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAA 1177596 Query 148114 ATGCCGTCGATGCTGTCGTTTTTGACGCC--AAGCAAAAAACACGAACACATTTGCGGAA 148171 || || ||||| |||||| | ||| | || | ||| || || ||| ||| || Sbjct 1177595 ATTCCCTCGATACTGTCG--TCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCC 1177538 Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231 | |||| |||||| || | ||| || ||||||||||| | | ||| | Sbjct 1177537 GCTGCGTGGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAA----GTATCGCTCCGAA 1177482 Query 148232 TGCGA----TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACG 148287 || | ||||| || || || | |||||||| |||||||| || || | || ||| Sbjct 1177481 AGCAAATTGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACG 1177422 Query 148288 CGCATGAGCATGTGCTGTGGTCGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCC 148346 ||||| ||||||||||| ||||||||| | | |||| |||||||| || || || Sbjct 1177421 CGCATCAGCATGTGCTGCGGTCGTTCGACGATCTTG-CCCTTGATCTTCAGCAGGTAGGA 1177363 Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 |||||| |||||| | ||||| || ||||| |||| || | ||||| |||||| Sbjct 1177362 CCGTTCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGC 1177303 Query 148407 CG 148408 || Sbjct 1177302 CG 1177301 >seq8899 Length=3132144 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | | ||||| || |||||||||||||| | ||||| | Sbjct 384465 CGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCA 384524 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| ||||||| |||| ||||||||||||||||| || || ||||| ||| Sbjct 384525 TCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTA 384584 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| |||| | || | || || | |||||| || || | || | Sbjct 384585 TCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATG 384644 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || ||||| | |||||||||||| Sbjct 384645 GTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq8738 Length=1280009 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||| || | |||||| |||||| ||||| || |||| | Sbjct 1177240 GACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCA 1177299 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||||||||| || || || || || ||| || |||| Sbjct 1177300 AAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACA 1177359 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||| || || | ||| | || || |||||||| || || Sbjct 1177360 TTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTG 1177419 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 1177420 ACGAAAATTTGCAT 1177433 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||| || | ||||| |||||| ||||| || |||| | Sbjct 1177468 GACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCA 1177527 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||||||||| || || || || || ||| || |||| Sbjct 1177528 AAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACA 1177587 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | |||||||| || | ||| | || || || || || || || Sbjct 1177588 TTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTG 1177647 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 1177648 ACGAAAATCTGCAT 1177661 >seq9240 Length=943838 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||||| |||| ||| | | | ||||| || ||||||||||||||| || || Sbjct 630362 ACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 630421 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || |||| |||| |||||||| || || || || ||||| Sbjct 630422 GCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCC 630481 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | ||||| | ||||| || || | Sbjct 630482 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAG 630541 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || || ||||| | ||| |||||||| Sbjct 630542 GGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476554054317120