Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq9207 127 2e-24 >seq9207 Length=1443628 Score = 127 bits (140), Expect = 2e-24 Identities = 371/566 (66%), Gaps = 9/566 (2%) Strand=Plus/Minus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || || ||||| | ||| |||| || || || | ||||||||||||||||||||| Sbjct 1179159 CACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTT 1179100 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 | ||| ||| |||| || || || || | || | ||| |||| ||||| Sbjct 1179099 CAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGC 1179040 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 |||| || || | ||| ||| |||||||||| | | || ||||| |||||||| || Sbjct 1179039 CACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCCATTTT 1178980 Query 136818 CAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | | || |||| | || ||||| | || || | || || || | || Sbjct 1178979 GAT--GCACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGCTGC 1178922 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA 136935 |||||||| ||||| ||||| || ||||||| | ||||| || | | ||| Sbjct 1178921 GGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATATC- 1178863 Query 136936 GTCGAGT-ATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 ||| | | | | || | || | | | ||||| || || || || || | Sbjct 1178862 GTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCTGGAA 1178803 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 |||||||| ||||| | || ||| | || |||| ||||||||||||| ||||| Sbjct 1178802 CTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTT 1178743 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 ||| |||| ||| || || || | || |||||||| || | || | |||||||| Sbjct 1178742 GTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCG 1178683 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGATTG 137174 | ||| || ||| | | || ||| ||||| |||||||||||| || || | | Sbjct 1178682 GATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAG---GTCCGTTGG 1178626 Query 137175 GGTTATATTCCACAAATCAAACTGCA 137200 ||| | | ||||| || |||||| Sbjct 1178625 GGTCTTCTCCCACATGTCGTACTGCA 1178600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445041033181440