Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 116 5e-20
seq9249 113 6e-19
seq9207 111 2e-18
>seq9254
Length=4138565
Score = 116 bits (128), Expect = 5e-20
Identities = 187/265 (71%), Gaps = 3/265 (1%)
Strand=Plus/Minus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855
|||||||||| || || ||||| | |||||||| |||||| |||| | |||
Sbjct 2197841 AGGCCGAGGCATCTTTCTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACT 2197782
Query 1455856 GGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914
||| |||| ||| ||| ||| || || |||||| |||||| ||||| ||| |||||
Sbjct 2197781 GGGAGTCGTTGAAAC-CGAGCGAACGTCACTTCATCTCGCACGTGCTCGC-TTTCTTCGC 2197724
Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974
||| || || ||||| |||||| |||| || || || | | || || || |
Sbjct 2197723 CGCATCGGACGGAATCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTGCAGGT 2197664
Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034
| | || || || | || || || ||||||||||| || |||||| ||||| || |
Sbjct 2197663 GACCGAAGCGCGCTGCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGCGAGAT 2197604
Query 1456035 CTACTCGCTCCTGATCGACACCTAC 1456059
||||| || ||||||||||| |||
Sbjct 2197603 GTACTCCCTGCTGATCGACACGTAC 2197579
>seq9249
Length=5918260
Score = 113 bits (124), Expect = 6e-19
Identities = 165/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||| || || |||| |||| || |||| ||
Sbjct 13059 ATCTACAAGGTGCTGAAGCAGGTCCATCCGGACACCGG-----CATC-TCGTCCAAGGCC 13112
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| || |||||| || ||||||||||| |||| || || | | || ||
Sbjct 13113 ATGAGCATTATGAACAGCTTCGTCAACGACATCTTCGAGCGGATTGCAGCGGAAGCGTCC 13172
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||||| || |||||| ||| || ||| | |||||||| |||||||||||
Sbjct 13173 CGGCTGGCGCACTACAACAAACGCTCGACCATCACGTCCCGCGAGATTCAGACCGCCGTC 13232
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| ||| | ||| || || ||||||| |||||||| |||||||| ||||
Sbjct 13233 CGGCTGCTGTTGCCGGGTGAGCTGGCCAAACACGCCGTGTCCGAGGGTACCA 13284
>seq9207
Length=1443628
Score = 111 bits (122), Expect = 2e-18
Identities = 169/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 259945 CACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGA 260004
||||| ||| || || ||||| |||||||| | ||| || ||| |||||
Sbjct 1177530 CACGCAGCGGCCCCAACTGTCGTCCTGCTTTCTCCTAACGATGTCGGACGACAGTATCGA 1177589
Query 260005 GGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGG 260064
||| || || |||||||| ||||||||||| || ||||||||| | ||||| ||||| ||
Sbjct 1177590 GGGAATTTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCCGCCGGAGGCATTGG 1177649
Query 260065 TTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTC 260124
| | || ||| | || || ||| | ||| | |||||||| ||||| ||
Sbjct 1177650 TCTGAACGTGCACTGCATCCGGGCGAAGGGTACGTACATTGCGGGCACGAACGGTATCTC 1177709
Query 260125 CAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTG 260184
|||||| | || || ||||| || || | ||| ||||||| || || || |||||| |
Sbjct 1177710 CAACGGGTTGGTTCCGATGCTGCGTGTCTACAACAACACGGCCCGGTATGTGGACCAGGG 1177769
Query 260185 C 260185
|
Sbjct 1177770 C 1177770
Score = 96.9 bits (106), Expect = 5e-14
Identities = 95/120 (79%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 262122 TCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGC 262181
||||||| ||| ||| |||||| |||||||||| || ||||| || ||||||||||
Sbjct 1178096 TCGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAACCAGC 1178155
Query 262182 AGAACCTGGGCACCACGACAGAG-GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCG 262240
||||| ||||||| | | || | | ||||||||||| ||||||||| ||| ||||||
Sbjct 1178156 AGAACGTGGGCACGATCA-AGTGCTCGAACCTGTGCACGGAGATCGTCGAGTACTCGTCG 1178214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176886033969904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |