Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq9240 122 8e-23
seq8738 107 2e-18
seq9325 104 2e-17
seq9239 102 7e-17
seq8899 91.5 1e-13
>seq9240
Length=943838
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| ||| | || |||||| ||||||||||| |||| |
Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||||||||| || || || |||| ||||||||||||| ||
Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||||| | | | | ||| || | || |||
Sbjct 630477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 630536
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || |||||||| | ||||| || || ||||||||
Sbjct 630537 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq8738
Length=1280009
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||| ||| | ||| |||||| || ||||||||||| | | || || | || |||
Sbjct 1177453 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCC 1177512
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || ||||| || | |||||||| || | ||| | | ||||||||||
Sbjct 1177513 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177572
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| ||||| | | | | |||||| | |||||||||| |||||| || ||
Sbjct 1177573 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTT 1177632
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || || || ||||||||
Sbjct 1177633 CCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||| ||| | ||| |||||| || ||||||||||| | | ||| || | || |||
Sbjct 1177225 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCC 1177284
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || ||||| || | |||||||| || | ||| | | ||||||||||
Sbjct 1177285 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177344
Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707
||||| ||||| | | | | |||||| | || ||||||| |||||| || ||
Sbjct 1177345 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTT 1177404
Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || || || || || |||||||
Sbjct 1177405 CCAGTCAGGGTCTTGACGAAAATTTGCATTC 1177435
>seq9325
Length=2359367
Score = 104 bits (114), Expect = 2e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || || || |||| ||||||||||| || || ||
Sbjct 261094 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAG 261035
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| |||||||| || | |||| | |||||||||| |||||| ||| | |
Sbjct 261034 ATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTC 260975
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | || ||||| | ||||| || || || |||| || |||||
Sbjct 260974 TCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACG 260915
Query 35726 AATATCTGCATTCTG 35740
|| ||||||||||||
Sbjct 260914 AAAATCTGCATTCTG 260900
>seq9239
Length=1433044
Score = 102 bits (112), Expect = 7e-17
Identities = 217/319 (68%), Gaps = 4/319 (1%)
Strand=Plus/Minus
Query 44103 CTAGAGACGGCCTCCACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGA 44162
|| || |||||| || || || | |||||||||| ||||| || || ||
Sbjct 683558 CTGGAAACGGCCAAAACGCACGACGATCTGTGGAACGCCGCCCAGCTGCAGATGGTGAAG 683499
Query 44163 GAAGGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCG 44222
|| || || ||||| || | |||| ||||| ||| ||||||||| | |||||| |
Sbjct 683498 GAGGGCAAGATGCATGGATTCCTGCGGATGTACTGGGCGAAGAAGATACTCGAGTGGA-G 683440
Query 44223 GAAGATGCGCAAACC-GCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGGA 44281
|| | || | | ||||||| || ||||| |||||||| ||||| | ||
Sbjct 683439 CAAAACGCCCGAGGAAGCGCTCGAGGCGGCGATCTACCTGAACGATCGTTACAGCCTAGA 683380
Query 44282 CGGTCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CA 44340
|| |||||||| ||||||||||| || || |||||||| || || | ||||| ||
Sbjct 683379 TGGGCGCGACCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCTGGAATTCACGATCA 683320
Query 44341 GGGCGTGGCGAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCG 44400
||| ||| || | ||||| ||| ||| | | |||||||||||| | |||||
Sbjct 683319 GGG-ATGGAAGGAACGGGACATCTTCGGTAAAATAAGATACATGAACTACGAAGGTTGTA 683261
Query 44401 TCAGAAAGTTTGATGTAAA 44419
|| ||||| ||||| ||
Sbjct 683260 AAAGGAAGTTCGATGTGAA 683242
>seq8899
Length=3132144
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/240 (69%), Gaps = 5/240 (2%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
|| |||||||| | | || |||| || | || |||||| ||||||||||| ||
Sbjct 384450 TTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCC 384509
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| | || || | || |||||||||||||| || || |||| ||||| || || |
Sbjct 384510 GAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGC 384569
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTC 35685
|||| | ||||| ||| ||| ||| | ||||| | | | | |||||| || ||
Sbjct 384570 GGAATTCCTTCCTTATCC-TGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTC 384628
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA---TTCTGTG 35742
||||| | ||||| || || || || | |||||||| || ||||||| |||||||
Sbjct 384629 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTTTCTGTG 384688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450739549847360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |