Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9207 293 2e-74 seq8899 116 4e-21 seq9325 111 2e-19 seq9240 111 2e-19 seq8738 87.8 2e-12 >seq9207 Length=1443628 Score = 293 bits (324), Expect = 2e-74 Identities = 1188/1859 (64%), Gaps = 26/1859 (1%) Strand=Plus/Plus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGG--CTACTT 7529 |||| ||||| | | ||| |||||||| | | ||||| | || ||| |||| | Sbjct 1177313 ACGATCGCGACTTTGGGTACAATTATTTTGGCTTCAAAACGCTCGAA--CGGTCCTACCT 1177370 Query 7530 GTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGT 7589 | |||| ||||| ||| | || |||||| || ||||||||| ||||||| || | Sbjct 1177371 GCTGAAGATCAAGGGCAAGATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCAT 1177430 Query 7590 GGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAA 7649 || || |||||||| ||||| || || || | ||||||||| | || | || | Sbjct 1177431 CGGGATCCACGGCGAGGACATCGATGCGGCAATCGAAACGTACAATTTGCTTTCGGAGCG 1177490 Query 7650 ACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTC 7709 | | ||||||||||| ||||| ||||||||||| |||| ||| | ||| ||| |||| Sbjct 1177491 ATACTTTACGCACGCCTCGCCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAACTGTC 1177550 Query 7710 CTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCG 7769 || || ||| | ||||| ||| || ||||| ||||| || |||||| |||||||| Sbjct 1177551 GTCCTGCTTTCTCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAA 1177610 Query 7770 CGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCG 7829 | ||||| || ||||| | || ||| || || ||||||||||| || | | || Sbjct 1177611 GCAGTGCGCACTGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACGTGCACTGCATCCG 1177670 Query 7830 CGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTT 7889 || || |||| ||| | | ||| ||||| | ||| ||| || | || ||| | Sbjct 1177671 GGCGAAGGGTACGTACATTGCGGGCACGAACGGTATCTCCAACGGGTTGGTTCCGATGCT 1177730 Query 7890 GCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGC 7946 ||| || | ||| ||| ||| || |||| |||||||| || ||||| || || Sbjct 1177731 GCGTGTCTACAACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGC 1177790 Query 7947 CGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCG 8006 |||||||| | ||||||||||| | || | | | | || ||||| Sbjct 1177791 GTTCGCCATCTACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAA 1177850 Query 8007 CAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGA 8066 |||| || || || | ||||| || | |||| || |||||||||| || Sbjct 1177851 AAACACTGGCAAGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGA 1177910 Query 8067 TCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTG 8126 |||||| |||| ||| || | ||| | ||| || ||||| || | || Sbjct 1177911 TCTGTTCATGAAGCGGGTGGAGGCGAACGAAATGTGGAGCCTTATGTGTCCGCACGACTG 1177970 Query 8127 CCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACA 8186 ||| | | | || | | ||||| | |||||| ||||| | Sbjct 1177971 CCCCGGGCTGTCGGAGTCGTGGGGCGAAGAGTTTGAGCGGCTGTACACGGGCTACGAGAA 1178030 Query 8187 CGACGGCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATG 8246 || || || | | ||||| ||||| |||| || ||| ||| || ||||| | Sbjct 1178031 GGAAGGTCGGTTCATCCGGCAGGTGAAGGCGCAGGATCTGTGGTTCGCGATCATCGAGTC 1178090 Query 8247 TCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAA 8306 || ||| || || ||||||||||||| ||||| || || |||||| || ||||| Sbjct 1178091 GCAGGTCGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAA 1178150 Query 8307 TCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAG 8366 || ||||||||||| || ||| || |||||| | || || || ||||| Sbjct 1178151 CCAGCAGAACGTGGGCACGATCAAGTGCTCGAACCTGTGCACGGAGATCGTCGAGTACTC 1178210 Query 8367 CGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGA 8426 || |||||| | || || |||||||| |||||| | | ||| ||| | ||| Sbjct 1178211 GTCGAAGGACGAAATTGCGGTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTG-TGA 1178269 Query 8427 TCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAA---CGCCGTGCAAGTGACGGT 8483 | || ||| |||||||| | | |||| | |||| | || ||| Sbjct 1178270 GGCCGGATC--GCACGTACGACTTCGTGAAGCTGAAGGAGGTCGCCAAGATCGTCACG-- 1178325 Query 8484 ACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCG-CGCGTAT 8542 ||||| | | ||||| || |||| | || || || || ||| |||| | Sbjct 1178326 -CGCAACCTGAACAAAATCATCGACATCAACTACTACCCGGTGCCGGAGGCGAAGCGT-T 1178383 Query 8543 CGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCA 8602 | |||||||||||| |||| | || | |||||||| || ||||||| ||||| Sbjct 1178384 CCAACATGCGCCACCGACCTATCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCATTC 1178443 Query 8603 TGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAA 8662 | |||||| || |||||||| | ||||| | | ||| ||| | || || | Sbjct 1178444 TCATGCGCCATCCGTACGAAAGTGAGGAAGCACAAAAGCTGAACCAGCAGATCTTTGAGA 1178503 Query 8663 CGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACT---TGCCCGAGAATTGGGCACGT 8719 | | || || ||||| | || || |||||| | | ||||| || || ||| Sbjct 1178504 CCATCTACTATGGCGCTCTGGAGGCTAGCTGTGAGTTGGCCGCCCGCGA---CGGTCCGT 1178560 Query 8720 ACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATG 8779 ||||| |||||| |||| | || | ||| ||||| |||| |||||||||||| | Sbjct 1178561 ACGAAACGTACGAGGGCTGTCCGGTGAGCAAGGGAATCCTGCAGTACGACATGTGGGAGA 1178620 Query 8780 TCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTT 8839 || || || ||||||| ||| ||| |||| || ||||| | ||| Sbjct 1178621 AGACCCCAACGGACCTGTGGAACTGGGCCGAGCTGAAGGAAAAGATTGCCAAGCATGGTA 1178680 Query 8840 TGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAA 8899 | || |||||||| || |||| ||||| |||||| | || || ||||| |||| | Sbjct 1178681 TCCGGAATTCGCTCCTGCTGGCACCGATGCCGACCGCCTCCACGGCCCAAATTCTGGGCA 1178740 Query 8900 ACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCG 8959 ||||||| || || ||||||| ||| ||||| ||| | || ||| || | |||| Sbjct 1178741 ACAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGCGTGCTGTCGGGCG 1178800 Query 8960 ATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGACG 9019 | || || | || | ||| || ||| || ||| |||| ||| | | || | Sbjct 1178801 AGTTCCAGGTGGTCAACCACCATCTGCTGCAGGATCTGACCGAACTCGGCCTGTGGGATG 1178860 Query 9020 ACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTGC 9079 || | ||| | ||| | | |||||| | ||| || || | | | Sbjct 1178861 ACGATATGAAGAACCAAATCCTTGCGCACAACGGTTCGATACAGCGGATCGAGGAAATTC 1178920 Query 9080 CTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCG 9139 | || ||||| || ||||| || || || ||||| || | | ||| ||| Sbjct 1178921 CGCAGCACATCCGCGACCTGTACAAGACGGTGTGGGAGATATCGGTGAAAACGTGCATCA 1178980 Query 9140 GCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAG 9199 ||||| ||||| | || || || || |||||| || || || ||| | ||| | Sbjct 1178981 AAATGGCCGCGGACCGGGGTGCGTTCATCGATCAGTCCCAGTCGTTCAACATTCACGTGG 1179040 Query 9200 CCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAA 9259 ||| ||| | |||| | || | ||||| | | ||||| ||||| | | Sbjct 1179041 CCGAACCGAACTACGGCAAGCTGACGTCGATTCACTTCTACGGCTGGAAGATGGGCCTGA 1179100 Query 9260 AAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAAC-CTATCAAATTTACAGT 9317 | || |||||||||||| ||||||| || || |||| ||||| | ||| | ||||| || Sbjct 1179101 AGACGGGCATGTACTATCTGCGCACCAAGCCGGCCG-TGAACGCGATCCAGTTTACGGT 1179158 >seq8899 Length=3132144 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | ||||||| || ||||| || || || ||||| |||||||||||||| Sbjct 384449 CTTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTC 384508 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || || | || || ||||| || || || || |||| |||||| ||||| || Sbjct 384509 CGAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGG 384568 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 ||| || ||||| || || |||||||| || || || | ||||| |||| || Sbjct 384569 CGGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTC 384628 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || ||||| || || || | ||||| |||||||| ||||| || Sbjct 384629 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682 >seq9325 Length=2359367 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | || || | || | ||| || || |||||||| || |||||||||||| Sbjct 261133 TTTCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCG 261074 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || | ||| || ||||| || || || || ||||||||||||||||| || Sbjct 261073 GACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGG 261014 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || || || ||||| || | ||||| || | || Sbjct 261013 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCG 260954 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || |||||||| ||||| || || || | || || |||||||| |||||| || Sbjct 260953 ACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCATTCTG 260900 >seq9240 Length=943838 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| || || || || || ||||| ||||||||||||||| Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || || |||| ||||||||| || ||||| Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || || | || || || | || || Sbjct 630477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 630536 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || |||||||| ||||| || | ||||| ||||| || ||||| ||| Sbjct 630537 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 630587 >seq8738 Length=1280009 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || |||||||| || || || | || || Sbjct 1177453 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCC 1177512 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | |||||||||||| || || || || || || || ||| Sbjct 1177513 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177572 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||| || | ||||| || | || ||||| || Sbjct 1177573 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTT 1177632 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 || || | || || |||||||| ||||| ||| || |||| Sbjct 1177633 CCCGTAAGGGTCTTGACGAAAATCTGCATCTTGATTCTGTT 1177673 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || |||||||| || || ||| | || || Sbjct 1177225 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCC 1177284 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | |||||||||||| || || || || || || || ||| Sbjct 1177285 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177344 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||| || | || || || | || ||||| || Sbjct 1177345 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTT 1177404 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | || || ||||||||||||||| Sbjct 1177405 CCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505337802731840