Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9207 239 6e-58 >seq9207 Length=1443628 Score = 239 bits (264), Expect = 6e-58 Identities = 981/1532 (64%), Gaps = 21/1532 (1%) Strand=Plus/Minus Query 68698 AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTA 68757 || ||||| | || || | || || || || || | ||| | ||| |||| | || Sbjct 1178828 AGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTC 1178769 Query 68758 CTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGC 68817 || || || || | || || || || ||||||||||| || || || || || ||| Sbjct 1178768 GAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGC 1178709 Query 68818 ATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGT 68877 || ||||||| || | ||| | | |||||| | || || || || || | Sbjct 1178708 ATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCG 1178649 Query 68878 TTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTA 68937 ||| | ||| || || | ||| | ||| | ||||| || || ||||| || Sbjct 1178648 GCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTG 1178589 Query 68938 CTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTT 68997 || | | || | || ||||| || || || || | | || | ||||| || Sbjct 1178588 CTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTA 1178529 Query 68998 GCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT 69057 ||||| | || || || || || || || || |||| || || || | ||||||||| Sbjct 1178528 GCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCC 1178469 Query 69058 AGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATA 69117 ||| ||| | |||| | | ||||| || ||||| |||| |||||| || || ||| Sbjct 1178468 TCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATA 1178409 Query 69118 CCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATA 69177 |||||||||| || | | | || |||| | || || || | || || || || || Sbjct 1178408 CCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATG 1178349 Query 69178 TCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAA 69237 || || ||||| || || || || || | || | || ||||| || || | || Sbjct 1178348 TCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAG 1178289 Query 69238 TCAAATCGTCC-ATCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAAC 69293 || | ||| | ||| | |||||||| ||||| || | || || ||||| || || Sbjct 1178288 TCGTA-CGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTGCACAC 1178230 Query 69294 TGCTA---CCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTT 69350 || | | || || || | || | | ||||| || || || || || || Sbjct 1178229 CGCAATTTCGTCCTTCGAC---GAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTT 1178173 Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || |||| || ||||| || ||||| ||| || || |||||||| || || | Sbjct 1178172 GATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTA 1178113 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTA 69469 ||| || || || | ||| || ||||| || | ||| | || ||| || || | Sbjct 1178112 CGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACA-GATCCTGCGCCTTCA 1178054 Query 69470 --TTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATC 69527 | ||| || | || || || || || || || ||||| || || || || Sbjct 1178053 CCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTC 1177996 Query 69528 TCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATC 69587 ||||| || || || || || || | |||||||| | ||||| || | Sbjct 1177995 GCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTT 1177936 Query 69588 ATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGT 69647 ||| || || ||||| || ||||| || | ||| || || || | || | | Sbjct 1177935 CGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGC 1177876 Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707 | || || || || || ||||| || |||||||||||||| | | ||| ||| Sbjct 1177875 ACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATG 1177816 Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767 ||| || || || || || || | | || || || || || || ||||| || | || Sbjct 1177815 CCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATA 1177756 Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827 | ||| ||||| || ||||| | ||||||||||| | || || || |||| || || Sbjct 1177755 CCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGT 1177696 Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTG 69886 || | ||| || | || | || || || | | | | ||||| || ||||| | Sbjct 1177695 GCCCGCAATGTACGTACCCTTCGCCCGGAT-GCAGTGCACGTTCAGACCAATGCCTCCGG 1177637 Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946 | || ||||| || || || | |||| ||||| || || ||||| || || || | Sbjct 1177636 CGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGT 1177577 Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006 | ||| | || ||||| ||| |||| ||| | | || |||| ||| | Sbjct 1177576 CCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACA 1177517 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 || || || ||||| || || || || ||||||| |||||| ||||| || || | Sbjct 1177516 TGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCG 1177457 Query 70067 ATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || || ||| | | | || || || || || || ||||||| ||| ||||| |||||| Sbjct 1177456 CATCGATGTCCTCGCCG-TGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGT 1177398 Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185 || || | || || || |||| |||||| || ||| || ||||| || |||||| Sbjct 1177397 TCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAA 1177338 Query 70186 TAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || ||||| |||||| | ||||| || || Sbjct 1177337 TAATTGTACCCAAAGTCGCGATCGTAGATGAT 1177306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686826439634880