Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 239 6e-58
>seq9207
Length=1443628
Score = 239 bits (264), Expect = 6e-58
Identities = 981/1532 (64%), Gaps = 21/1532 (1%)
Strand=Plus/Minus
Query 68698 AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTA 68757
|| ||||| | || || | || || || || || | ||| | ||| |||| | ||
Sbjct 1178828 AGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTC 1178769
Query 68758 CTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGC 68817
|| || || || | || || || || ||||||||||| || || || || || |||
Sbjct 1178768 GAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGC 1178709
Query 68818 ATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGT 68877
|| ||||||| || | ||| | | |||||| | || || || || || |
Sbjct 1178708 ATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCG 1178649
Query 68878 TTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTA 68937
||| | ||| || || | ||| | ||| | ||||| || || ||||| ||
Sbjct 1178648 GCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTG 1178589
Query 68938 CTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTT 68997
|| | | || | || ||||| || || || || | | || | ||||| ||
Sbjct 1178588 CTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTA 1178529
Query 68998 GCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT 69057
||||| | || || || || || || || || |||| || || || | |||||||||
Sbjct 1178528 GCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCC 1178469
Query 69058 AGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATA 69117
||| ||| | |||| | | ||||| || ||||| |||| |||||| || || |||
Sbjct 1178468 TCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATA 1178409
Query 69118 CCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATA 69177
|||||||||| || | | | || |||| | || || || | || || || || ||
Sbjct 1178408 CCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATG 1178349
Query 69178 TCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAA 69237
|| || ||||| || || || || || | || | || ||||| || || | ||
Sbjct 1178348 TCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAG 1178289
Query 69238 TCAAATCGTCC-ATCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAAC 69293
|| | ||| | ||| | |||||||| ||||| || | || || ||||| || ||
Sbjct 1178288 TCGTA-CGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTGCACAC 1178230
Query 69294 TGCTA---CCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTT 69350
|| | | || || || | || | | ||||| || || || || || ||
Sbjct 1178229 CGCAATTTCGTCCTTCGAC---GAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTT 1178173
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || |||| || ||||| || ||||| ||| || || |||||||| || || |
Sbjct 1178172 GATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTA 1178113
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTA 69469
||| || || || | ||| || ||||| || | ||| | || ||| || || |
Sbjct 1178112 CGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACA-GATCCTGCGCCTTCA 1178054
Query 69470 --TTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATC 69527
| ||| || | || || || || || || || ||||| || || || ||
Sbjct 1178053 CCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTC 1177996
Query 69528 TCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATC 69587
||||| || || || || || || | |||||||| | ||||| || |
Sbjct 1177995 GCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTT 1177936
Query 69588 ATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGT 69647
||| || || ||||| || ||||| || | ||| || || || | || | |
Sbjct 1177935 CGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGC 1177876
Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707
| || || || || || ||||| || |||||||||||||| | | ||| |||
Sbjct 1177875 ACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATG 1177816
Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767
||| || || || || || || | | || || || || || || ||||| || | ||
Sbjct 1177815 CCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATA 1177756
Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827
| ||| ||||| || ||||| | ||||||||||| | || || || |||| || ||
Sbjct 1177755 CCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGT 1177696
Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTG 69886
|| | ||| || | || | || || || | | | | ||||| || ||||| |
Sbjct 1177695 GCCCGCAATGTACGTACCCTTCGCCCGGAT-GCAGTGCACGTTCAGACCAATGCCTCCGG 1177637
Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946
| || ||||| || || || | |||| ||||| || || ||||| || || || |
Sbjct 1177636 CGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGT 1177577
Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006
| ||| | || ||||| ||| |||| ||| | | || |||| ||| |
Sbjct 1177576 CCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACA 1177517
Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066
|| || || ||||| || || || || ||||||| |||||| ||||| || || |
Sbjct 1177516 TGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCG 1177457
Query 70067 ATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125
|| || ||| | | | || || || || || || ||||||| ||| ||||| ||||||
Sbjct 1177456 CATCGATGTCCTCGCCG-TGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGT 1177398
Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185
|| || | || || || |||| |||||| || ||| || ||||| || ||||||
Sbjct 1177397 TCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAA 1177338
Query 70186 TAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
|| ||||| |||||| | ||||| || ||
Sbjct 1177337 TAATTGTACCCAAAGTCGCGATCGTAGATGAT 1177306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686826439634880
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