Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq9207 172 5e-38 >seq9207 Length=1443628 Score = 172 bits (190), Expect = 5e-38 Identities = 1012/1604 (63%), Gaps = 33/1604 (2%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || || || || || || ||||||||||||||||| ||| |||||||| Sbjct 1179164 TTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCC 1179105 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTAATTGG 130523 || || || || || || || || ||| || || | ||| ||| || | Sbjct 1179104 GTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCA--GCTTGCCGTAGTTCG 1179047 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 ||| |||||| ||||||| ||| || || ||||| || || || |||| ||| || | Sbjct 1179046 GTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGG 1178987 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | || ||| | ||| | | |||||||| | |||||||| || || | ||| Sbjct 1178986 CCATTTTGATGCACGTTTTCACCGAT-ATCTCCCACACCGTCTTGTACAGGTCGCGGATG 1178928 Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702 || | || || | | ||| || | |||||||| || | |||| ||| | Sbjct 1178927 TGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTC 1178868 Query 130703 ATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATT 130762 ||| | ||| ||| || || | ||||| | | || ||| | || | | Sbjct 1178867 ATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACC 1178808 Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 || || || || | ||| ||||| | | ||| | ||| ||| |||| || || || Sbjct 1178807 TGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGAC 1178748 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 ||||||||||| | ||||| || || | ||||| ||||| ||||| | || ||| Sbjct 1178747 TCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAA 1178688 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942 || || | ||| ||| | | || ||| ||||| || |||| | ||| || || Sbjct 1178687 TTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTCCGTT 1178628 Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCG 131002 || | || | |||||| || | || || || || || || | |||| | ||| Sbjct 1178627 GGGGTC---TTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCG 1178571 Query 131003 AACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAA 131062 ||| |||||| || ||| |||| || |||||| |||| ||| || || Sbjct 1178570 TACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAG 1178511 Query 131063 TAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAAT 131122 || ||||| || || || | || | | || |||| | || ||||| ||| Sbjct 1178510 TAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGG 1178451 Query 131123 TTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTT 131182 ||| | ||| || || || || | ||||| | || | || | |||| || Sbjct 1178450 CGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGC 1178391 Query 131183 AAATTACATTTACGCGAA-CATTCGGTG--GGATAAAGGTTAATGTCAATTATTTTGTTT 131239 | || | |||| | | ||| || || ||| ||||| || |||||||| Sbjct 1178390 ATGTTGGA---ACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTC 1178334 Query 131240 AAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAGTT 131299 | |||||| || || | | ||| |||| || |||| || |||||| | Sbjct 1178333 AGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTGCGA--- 1178277 Query 131300 TCGAGGTTTACAAATTGATTTA-CACATATTGACGCCAGATTACAAACTGCCGTTTCGTC 131358 || | | ||||| || | | || || ||||||||||| || || || ||||||| Sbjct 1178276 TCCGGCCTCACAAACATGTTCAGCGCA-ATCGACGCCAGATTGCACACCGCAATTTCGTC 1178218 Query 131359 ATAATCGC--AATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAA 131416 | ||| | |||| || || || | ||||| || || ||| || ||||||| Sbjct 1178217 CT--TCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACG 1178160 Query 131417 TTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCGT 131475 || || || ||||| || || || | |||||||| | |||||| ||| |||||| Sbjct 1178159 TTCTGCTGGTTGCTCTTCCGGTTG-CACGCATCCTTGTAGAGCATGTACGGCACGCCCGT 1178101 Query 131476 TTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTG 131533 ||||| || | || || || |||| | || | | || || || || Sbjct 1178100 CTCGACCTGCGACTCGATGATCG--CGAACCACAGATCCTGCGCCTTCACCTGCCGGATG 1178043 Query 131534 TATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTG 131593 | | || || ||||| ||||| | ||||| | || ||| |||| Sbjct 1178042 AACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCC 1177983 Query 131594 TCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGC 131653 || ||| || ||| |||||||| || ||||| ||||| || || ||| Sbjct 1177982 GACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCGC 1177923 Query 131654 TTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCT 131713 ||||| |||| |||||||||||| | |||||| |||| || | || ||| || Sbjct 1177922 TTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCC 1177863 Query 131714 GTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAA 131773 | || | |||| |||| || | ||| || || | || ||||||| || || | Sbjct 1177862 TTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGG 1177803 Query 131774 TACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTG 131830 || | || | || || ||| || ||||| || | |||| || || ||||| Sbjct 1177802 TAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTG 1177743 Query 131831 TTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAG 131890 ||||| || |||| ||| || |||| ||||||| | | || || |||| | |||||| Sbjct 1177742 TTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTAC 1177683 Query 131891 CTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATT 131950 | || || || | ||| ||| ||||| || ||||| |||||| || | || ||||| Sbjct 1177682 GTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATC 1177623 Query 131951 AGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 |||||||| | | || |||| || || || || | ||||| Sbjct 1177622 AGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTC 1177579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424884724106304