Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 172 5e-38
>seq9207
Length=1443628
Score = 172 bits (190), Expect = 5e-38
Identities = 1012/1604 (63%), Gaps = 33/1604 (2%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || || || || || || ||||||||||||||||| ||| ||||||||
Sbjct 1179164 TTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCC 1179105
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTAATTGG 130523
|| || || || || || || || ||| || || | ||| ||| || |
Sbjct 1179104 GTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCA--GCTTGCCGTAGTTCG 1179047
Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583
||| |||||| ||||||| ||| || || ||||| || || || |||| ||| || |
Sbjct 1179046 GTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGG 1178987
Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642
|||| | || ||| | ||| | | |||||||| | |||||||| || || | |||
Sbjct 1178986 CCATTTTGATGCACGTTTTCACCGAT-ATCTCCCACACCGTCTTGTACAGGTCGCGGATG 1178928
Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702
|| | || || | | ||| || | |||||||| || | |||| ||| |
Sbjct 1178927 TGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTC 1178868
Query 130703 ATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATT 130762
||| | ||| ||| || || | ||||| | | || ||| | || | |
Sbjct 1178867 ATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACC 1178808
Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822
|| || || || | ||| ||||| | | ||| | ||| ||| |||| || || ||
Sbjct 1178807 TGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGAC 1178748
Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882
||||||||||| | ||||| || || | ||||| ||||| ||||| | || |||
Sbjct 1178747 TCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAA 1178688
Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942
|| || | ||| ||| | | || ||| ||||| || |||| | ||| || ||
Sbjct 1178687 TTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTCCGTT 1178628
Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCG 131002
|| | || | |||||| || | || || || || || || | |||| | |||
Sbjct 1178627 GGGGTC---TTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCG 1178571
Query 131003 AACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAA 131062
||| |||||| || ||| |||| || |||||| |||| ||| || ||
Sbjct 1178570 TACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAG 1178511
Query 131063 TAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAAT 131122
|| ||||| || || || | || | | || |||| | || ||||| |||
Sbjct 1178510 TAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGG 1178451
Query 131123 TTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTT 131182
||| | ||| || || || || | ||||| | || | || | |||| ||
Sbjct 1178450 CGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGC 1178391
Query 131183 AAATTACATTTACGCGAA-CATTCGGTG--GGATAAAGGTTAATGTCAATTATTTTGTTT 131239
| || | |||| | | ||| || || ||| ||||| || ||||||||
Sbjct 1178390 ATGTTGGA---ACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTC 1178334
Query 131240 AAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAGTT 131299
| |||||| || || | | ||| |||| || |||| || |||||| |
Sbjct 1178333 AGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTGCGA--- 1178277
Query 131300 TCGAGGTTTACAAATTGATTTA-CACATATTGACGCCAGATTACAAACTGCCGTTTCGTC 131358
|| | | ||||| || | | || || ||||||||||| || || || |||||||
Sbjct 1178276 TCCGGCCTCACAAACATGTTCAGCGCA-ATCGACGCCAGATTGCACACCGCAATTTCGTC 1178218
Query 131359 ATAATCGC--AATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAA 131416
| ||| | |||| || || || | ||||| || || ||| || |||||||
Sbjct 1178217 CT--TCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACG 1178160
Query 131417 TTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGTGCCCGT 131475
|| || || ||||| || || || | |||||||| | |||||| ||| ||||||
Sbjct 1178159 TTCTGCTGGTTGCTCTTCCGGTTG-CACGCATCCTTGTAGAGCATGTACGGCACGCCCGT 1178101
Query 131476 TTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTG 131533
||||| || | || || || |||| | || | | || || || ||
Sbjct 1178100 CTCGACCTGCGACTCGATGATCG--CGAACCACAGATCCTGCGCCTTCACCTGCCGGATG 1178043
Query 131534 TATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTG 131593
| | || || ||||| ||||| | ||||| | || ||| ||||
Sbjct 1178042 AACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCC 1177983
Query 131594 TCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGC 131653
|| ||| || ||| |||||||| || ||||| ||||| || || |||
Sbjct 1177982 GACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCGC 1177923
Query 131654 TTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCT 131713
||||| |||| |||||||||||| | |||||| |||| || | || ||| ||
Sbjct 1177922 TTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCC 1177863
Query 131714 GTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAA 131773
| || | |||| |||| || | ||| || || | || ||||||| || || |
Sbjct 1177862 TTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGG 1177803
Query 131774 TACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTG 131830
|| | || | || || ||| || ||||| || | |||| || || |||||
Sbjct 1177802 TAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTG 1177743
Query 131831 TTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAG 131890
||||| || |||| ||| || |||| ||||||| | | || || |||| | ||||||
Sbjct 1177742 TTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTAC 1177683
Query 131891 CTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATT 131950
| || || || | ||| ||| ||||| || ||||| |||||| || | || |||||
Sbjct 1177682 GTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATC 1177623
Query 131951 AGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
|||||||| | | || |||| || || || || | |||||
Sbjct 1177622 AGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTC 1177579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424884724106304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |