Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 114 4e-20
seq9207 104 7e-17
>seq9254
Length=4138565
Score = 114 bits (126), Expect = 4e-20
Identities = 128/170 (75%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||||| |||||| | ||||| ||||| | ||||| ||| | || || ||||||||
Sbjct 2197392 CAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAGGGAATTTTCTTCAGCGGCAG 2197333
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
|||| ||| | ||||||||| | || ||||| ||||| |||| || ||||||| |
Sbjct 2197332 CTTT-GCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATGCCAGGCTTGACCTTCTCGA 2197274
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTT 443865
|||| ||||| || |||||||| ||||| || ||||| || || |||
Sbjct 2197273 ACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTT 2197224
>seq9207
Length=1443628
Score = 104 bits (114), Expect = 7e-17
Identities = 245/357 (69%), Gaps = 16/357 (4%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||| | ||||||| ||| || || || || || || ||| ||| ||
Sbjct 1177723 CCGATGCTGCGTGTCTACAACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGT 1177782
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTTTTA 255097
|| || |||||| |||||||||| ||||||||||| | ||| |||| |||| |
Sbjct 1177783 CCCGGTGCGTTCGCCATCTACCTCGAGCCGTGGCATGGCGATGTGTTTGA---GTTTCTC 1177839
Query 255098 CTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTAC-AC-CGCTG 255155
||| | || || |||| |||||| | || || ||||| | | || |||||
Sbjct 1177840 GATCTGAAGAAAAACACTGGCAAGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTG 1177899
Query 255156 TCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATG 255214
| ||||| | |||||||| ||| || ||||| ||| |||| | |||||||| |||
Sbjct 1177900 T-GGGTGCCG-GATCTGTTCATGAAGCGGGTGGAGGCGA-ACGAAATGTGGAGCCTTATG 1177956
Query 255215 TGTCCCAACTTATCGCCCGGTCTAGTC-GACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273
||||| || | ||||| || ||| || || ||||| || |||||||| |||||
Sbjct 1177957 TGTCCGCACGACTGCCCCGGGCT-GTCGGAGTCGTGGGGCGAAGAGTTTGAGCGGCTGTA 1178015
Query 255274 TCTGGAGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTG 255330
|| |||||| | || |||||| | || || ||| ||| || ||||||
Sbjct 1178016 CACGGGCTACGAGAAGGAAGGTCGGTTCATCCGGCAGGTGAAGGCGCAG--GATCTG 1178070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588140797476440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |