Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 140 4e-28
>seq9207
Length=1443628
Score = 140 bits (154), Expect = 4e-28
Identities = 574/893 (64%), Gaps = 19/893 (2%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||| ||| | ||||| || || || | || || || |||| ||||| || |||||
Sbjct 1178778 GTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGA 1178719
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
||| || ||||| ||||||| || || || || | ||| | || || |||
Sbjct 1178718 GGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTC 1178659
Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||| || | |||||| | || | | |||| || || |||||||||| ||||
Sbjct 1178658 CTTCAGCTCGGCCCAGTTCCACAGGTCCG-TTGGGGTCTTCT-CCCACATGTCGTACTGC 1178601
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | || | | | | ||| | ||||| | ||||| || | ||| | | | |||
Sbjct 1178600 AGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCC 1178541
Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004
|| |||||||| |||||||| | | | || ||||| |||||||| | |||| |
Sbjct 1178540 AACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGC 1178481
Query 111005 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCT 111064
| | ||||| || || | | | ||| | ||| || |||| || | ||
Sbjct 1178480 TTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCC 1178421
Query 111065 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCGCAGTCTCAACGG 111122
|| || || | ||| ||||||| ||| ||||| || || ||||| | || |||
Sbjct 1178420 TGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGC-CTCCGGCACCGG 1178362
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
| || | || |||| |||| | ||| || || || || ||||| | || || |
Sbjct 1178361 G-TAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCT 1178303
Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTG 111242
|| || | | || | |||||| || | ||| || | || || || |
Sbjct 1178302 TCAGCTTCACGAAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAATCG 1178246
Query 111243 ATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATA 111302
| |||| |||||| || || | || ||||| | |||||| | || || || || |
Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACA 1178186
Query 111303 AGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCT 111362
||| || | ||| ||||| |||| |||| ||||| |||||| ||||||||||||||
Sbjct 1178185 GGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCT 1178126
Query 111363 TGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT 111422
||||||||||||| ||| |||||||| ||| || | || || || ||| | ||
Sbjct 1178125 TGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGAT 1178066
Query 111423 CGGCGGCTGGTACAATGGC--GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 111480
| | || | || || | || ||| || ||| |||||| ||||| ||
Sbjct 1178065 C--CTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCG 1178008
Query 111481 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 111540
|||||||| || ||| || || || || || || | || ||||| | |||
Sbjct 1178007 CTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCT 1177948
Query 111541 CCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
||| | | || |||| |||||||||||||| || || || | ||||||
Sbjct 1177947 CCA--CATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAG 1177897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627956698963200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |