Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 129 7e-25
seq9207 120 4e-22
seq9243 100 4e-16
seq9217 96.9 4e-15
>seq9254
Length=4138565
Score = 129 bits (142), Expect = 7e-25
Identities = 280/412 (68%), Gaps = 8/412 (2%)
Strand=Plus/Minus
Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861
|| || ||||| | |||||| | | || || || |||| | ||||| ||||| |
Sbjct 2756672 TACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAAAA 2756613
Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 11919
|| ||||||||||| || || || | | | | | ||| | | |||| | ||| | |
Sbjct 2756612 ACACCCTTCTATCCGCGTTCGCCGTACG-CTTGTGCCAAGATGTACGGCT-ACTGGATTG 2756555
Query 11920 TGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACG 11979
||| |||||||| ||| | || | | ||||| ||| ||| ||||| || |||||||
Sbjct 2756554 TGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATTCTTTTTAACCACG 2756495
Query 11980 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACA 12037
|||| || || || || | |||| || || ||||| ||| | || | ||
Sbjct 2756494 AGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAAGATAACCCGGTCAGTGGCGAA-- 2756437
Query 12038 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 12097
|||| | || || ||||| | | || |||| || || || || || | |||||
Sbjct 2756436 AATCTCGCTTGGCCAGCAGGAGTGCTTGGAGCTGGGCAATCTTGACTCCAAGCGTGACTG 2756377
Query 12098 GGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGA 12157
||| |||||||| ||||| || || ||||||||||| | | || || || | ||||
Sbjct 2756376 GGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCTAATGATGCAGCAGGACAAACCGGA 2756317
Query 12158 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209
|| | |||| |||| || |||||||| ||||| || ||||||| || |||
Sbjct 2756316 AGATTTTGTCATCGCCACTGGGGAGACGCACTCGGTGCGGGAGTTTGTGGAG 2756265
>seq9207
Length=1443628
Score = 120 bits (132), Expect = 4e-22
Identities = 998/1602 (62%), Gaps = 34/1602 (2%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| || |||||||| |||||||| || ||| ||||||| | || | || || || | |
Sbjct 1179122 CGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTC 1179063
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | | | || ||| | | ||| | ||||| |||||||||||
Sbjct 1179062 AGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAAC 1179003
Query 117957 CGTCCCCGATCCGCCGCCATATCAAT-CACATCCTTCATCTTGATTTCCCACACAGTCCT 118015
||||| ||||| ||||| | || ||| | |||| | || |||||||| ||| |
Sbjct 1179002 GCACCCCGGTCCGCGGCCATTTTGATGCACGTT-TTCACCGATATCTCCCACACCGTCTT 1178944
Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075
||| |||| || | | || || ||| |||| | || ||| | ||| |
Sbjct 1178943 GTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCC----GCTGTATCGAACCGTTGT 1178888
Query 118076 GACCATGA----GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131
| || | | | ||||||||| | ||| || || | | | ||||||| ||
Sbjct 1178887 GCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCA 1178828
Query 118132 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 118191
||||| | ||||| || ||||| |||| || ||| | |||| || |
Sbjct 1178827 GCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCG 1178768
Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251
||||| ||||| || |||| ||||| |||| |||||||| |||||||| || ||||
Sbjct 1178767 AAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCA 1178708
Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311
| ||||||| || || || |||| ||| | | ||| |||||| || ||
Sbjct 1178707 TCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGG 1178648
Query 118312 CCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 118371
|||||| | | | ||| | || |||||| || |||| ||||| || | |
Sbjct 1178647 CCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGC 1178588
Query 118372 ACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCG 118431
| | || | ||||| | || || || || || || | ||||| || |||| |
Sbjct 1178587 TCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAG 1178528
Query 118432 CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGG--CCTC 118489
|||| || || | | || || || ||||| || | |||| || || | | ||
Sbjct 1178527 CCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA--GCTTTTGTGCTTC 1178470
Query 118490 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 118549
|| || ||| | || | ||| || |||| || | || || || ||||
Sbjct 1178469 CTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGAT 1178410
Query 118550 GCCAATTGGGCGATGTCTCATATTAGA---CTTCCGAGCGGTCTCCACGGGATAAAAATT 118606
|| || || || || | ||| || || |||| || | ||| || || | ||
Sbjct 1178409 ACCGATAGGTCGGTGGCGCATGTTGGAACGCTTC---GCCTCCGGCACCGGGTAGTAGTT 1178353
Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666
| ||||| | | || || || ||||| | ||| | || || | ||||| |
Sbjct 1178352 GATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCAC 1178293
Query 118667 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 118726
| | || | ||||| || | ||| || | || || || |||||||||||
Sbjct 1178292 GAAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATT 1178236
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
||||| | | || ||||| | |||||| | || |||||||||| ||| || |
Sbjct 1178235 GCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCA 1178176
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
||| || ||||||| ||||| || || ||| ||| |||||||||||||| |||||
Sbjct 1178175 CTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCAT 1178116
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG 118906
||| ||| |||||||| || |||| || || || ||| | ||| ||
Sbjct 1178115 GTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCTT 1178056
Query 118907 CACAGTGGC-GTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 118965
||| || | | || || || || | |||||| ||||| || ||||||||||
Sbjct 1178055 CAC-CTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTT 1177997
Query 118966 CACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCAC 119025
| ||| | ||| || ||||| || | | || || | || ||| |
Sbjct 1177996 CGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGT 1177937
Query 119026 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-A 119084
| |||| |||||||||||||| || || || | ||| ||||| |||| | || ||
Sbjct 1177936 TCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCG 1177877
Query 119085 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 119144
|| || || || | | || || || || || | ||| || | | ||| |
Sbjct 1177876 CACGGACCTCCTCCTTGCCAGTG-TTTTTCTTCAGATCGAGAAACTCAAACACATCGCCA 1177818
Query 119145 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACA 119201
|||||||| || ||||| | |||| | || ||| || |||||| |||
Sbjct 1177817 TGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACA 1177758
Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261
|||| || ||| ||| | ||||| ||||| |||| | || | ||| || ||
Sbjct 1177757 TACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTC 1177698
Query 119262 GTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319
|| ||| || |||| || || || | || ||| | || || |||||| || |
Sbjct 1177697 GTGCCCGCAATGTACG-TAC-CCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTC 1177640
Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379
| || |||| ||||| | ||||||| | | || || |||| || || ||||| ||
Sbjct 1177639 CGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGT 1177580
Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421
| || | | | ||| |||||| ||||| ||| ||||
Sbjct 1177579 CGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCC 1177538
>seq9243
Length=2754563
Score = 100 bits (110), Expect = 4e-16
Identities = 283/423 (67%), Gaps = 24/423 (6%)
Strand=Plus/Plus
Query 14056 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 14115
||||| ||||| |||||||| ||||| ||||| || | ||| ||||| || | |||||
Sbjct 2616413 GATCTGCCGATCGAAGCGACCGGGGCGAAGGAGCGCCTTGTCTAGGATGTCCACCCGGTT 2616472
Query 14116 CGTCGCCGCGATGACAACGATGCCCGTC-TCGTTATCAAAGCCATCCATCTCAGTCAAG- 14173
||| ||||| | || || | |||| |||| || || || |||||||| | | ||
Sbjct 2616473 CGTTGCCGCCAGCACGACCACATTCGTCGTCGT-ATTGAATCCGTCCATCTC-GACGAGC 2616530
Query 14174 AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCC--GCACT----G 14227
|| || |||| || |||| | | | ||| || ||||| || || |
Sbjct 2616531 AGCTGGTTGAGCGT--GTTCTCTTGC-----TCGGAGTGT--CCACCGAAGCTCTTCCCG 2616581
Query 14228 CGTTGCTT---ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCA 14284
| |||| ||| |||||||| |||||||||||||| | || || ||| |||||
Sbjct 2616582 CCACGCTTTCGACCTACGGCGTCGATTTCATCGATGAACAAAATGCACGGTGCATTTTTG 2616641
Query 14285 CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACA 14344
|| || | | || ||||| ||||| | | | ||||||||| |||||||| |||| |
Sbjct 2616642 CGCGCCATGGCGAACATATCGCGCACACGCGACGGACCGACACCGACAAACATTTCCAAA 2616701
Query 14345 AAATTGGCGGCGGA-ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGC 14403
|| | | | || || | |||||| || ||||| | ||| || ||| | || ||
Sbjct 2616702 AACTCCGATCCCGACACGGT-GATGAACGGTACGTTCGCTTCCCCAGCGGTCGCCTTCGC 2616760
Query 14404 GAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGC 14463
||| || || || || || || ||| || | || | |||||| ||||| | ||
Sbjct 2616761 GAGAAGCGTTTTTCCGGTACCGGGTGGGCCAGTCAGCATGGCACCTTTGGGGATTTTCGC 2616820
Query 14464 ACC 14466
|||
Sbjct 2616821 ACC 2616823
>seq9217
Length=1236993
Score = 96.9 bits (106), Expect = 4e-15
Identities = 287/432 (66%), Gaps = 12/432 (3%)
Strand=Plus/Plus
Query 178885 CCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 178944
|| || ||||| || |||| |||||||| || | ||| |||| | |||| ||| ||
Sbjct 55686 CCGGTACCGATACCGTCGGCACCGTTCACCAGTAGCATCGGAATGATGGGCAGATACCAG 55745
Query 178945 TCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTCGG 179003
||||||| || || | | ||| || | | || ||||| || |||||| |||
Sbjct 55746 ACTGGTTCGAT-GCGCTGATTGTCCTCGTACTGGTACGCGAGCAGCGGATCGTCCAGCGG 55804
Query 179004 ATCAAAGATTTTACGAG-CATCCCTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 179062
|| ||||| || | || | | || | ||||||||||| | || || ||
Sbjct 55805 ATGGAAGATGCAGCGCGTCAGGGCCGAC-AGCATGGTGAAGATGTAACGCGGGCTAG-CG 55862
Query 179063 CA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATA 179121
| || |||||||| | | ||||| || || ||||| | || | || ||||||||
Sbjct 55863 CTGTCCTTGCCACCGGTCAACCGCGTACCGAACTGACCGCCCGGGTACAGCAGATTGATG 55922
Query 179122 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCG-AGGGAGACT-- 179178
|| || || | ||||| | ||||| || || ||||| || | || | ||||
Sbjct 55923 TTATTACTGCCGACGTAGTTCTGCGCCAAGTTAACGATCGT---CGAGCAGAGCGACTGC 55979
Query 179179 TCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATC 179238
|| ||||||||||| || ||| | |||||||| | | |||| ||| |||||||||| |
Sbjct 55980 TCGCCGTGATGGTATGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTCACC 56039
Query 179239 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGG 179298
|| |||| ||| | |||||| | ||| |||||| | || ||||| ||
Sbjct 56040 TCGCGCTTGTCGTTACGCTTGAAGCAGGTGAACAGCACCTTCCGCTGGCCCGGCTTCAGC 56099
Query 179299 CCGTCGGCCATG 179310
|||||| ||||
Sbjct 56100 CCGTCGAGCATG 56111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618361049619520
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