Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq9254 87.8 2e-12 >seq9254 Length=4138565 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/237 (69%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT--- 94779 |||||| |||| | |||||| | | ||||| || || ||||| |||| ||| || Sbjct 2197463 GCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATTTCG 2197404 Query 94780 -GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTAT 94838 | | |||| | ||| || ||||| | |||| ||||| || ||||| || Sbjct 2197403 AGCAAGAAAGCCAACTTCG---GC-GAGCGTGTTGTCGCGTTTGCCGCCGTCGAGGGAAT 2197348 Query 94839 CTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGG 94898 |||||| || ||| |||||| | ||||| ||||||||||| || |||||||| Sbjct 2197347 TTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATGCCAGG 2197288 Query 94899 TCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||| |||||||| || || ||||||||||| | ||| || ||||| Sbjct 2197287 CTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTGC 2197231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583190867030080