Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq8899 170 6e-37
seq8738 165 2e-35
seq9325 114 4e-20
seq8884 93.3 1e-13
seq8875 93.3 1e-13
seq9327 91.5 4e-13
seq9312 91.5 4e-13
seq9311 91.5 4e-13
seq9250 91.5 4e-13
seq9235 87.8 5e-12
seq9238 86.0 2e-11
>seq8899
Length=3132144
Score = 170 bits (188), Expect = 6e-37
Identities = 177/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140506 ACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565
|| |||||||||| | || ||||| || ||||| || ||||| || ||||| || || |
Sbjct 384448 ACTTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGT 384507
Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625
| || | || || ||||| || || || || || || ||||| ||||| || ||||| |
Sbjct 384508 CCGAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTG 384567
Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685
| ||||||||||| |||||||||||||| || || ||||| || |||| || || || |
Sbjct 384568 GCGGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCT 384627
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || ||||| || | ||||| || || || ||||| || |||||||||||
Sbjct 384628 CGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq8738
Length=1280009
Score = 165 bits (182), Expect = 2e-35
Identities = 178/236 (75%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
|||| | |||||| || | | || || ||||| ||||||||||| || || || || |
Sbjct 1177199 TTTAAAAACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGT 1177258
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | || || |||||||| || || || || |||||||| ||||| |||||||
Sbjct 1177259 AATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 1177318
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| ||||| || || |||||||| || || || ||||| ||||||| || || |
Sbjct 1177319 CTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAG 1177378
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| ||||| || | || | |||||||| || || || || || ||||| ||||||
Sbjct 1177379 GCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434
Score = 163 bits (180), Expect = 9e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | || || ||||| ||||||||||| || || || || |
Sbjct 1177427 TTTGCATTCCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGT 1177486
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | || || |||||||| || || || || |||||||| ||||| |||||||
Sbjct 1177487 AATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 1177546
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| ||||| || || |||||||| || || || ||||| ||||||| || || |
Sbjct 1177547 CTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAG 1177606
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || | || | |||||||| || || || || || |||||||||||
Sbjct 1177607 GCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
>seq9325
Length=2359367
Score = 114 bits (126), Expect = 4e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| | ||||| || || || || || || || || || || | || || || ||
Sbjct 261115 AGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 261056
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || |||||||| ||||| | ||| |||||||| || ||||| || || || |||
Sbjct 261055 TCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 260996
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || ||||| || || || || || | || || || || || || || || | |||
Sbjct 260995 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTC 260936
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || || || || ||||||||||||
Sbjct 260935 TTGCCAGTCAGCGTCTTCACGAAAATCTGCATT 260903
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 600926 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 600867
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 600866 CCCGGCATCTCCA 600854
>seq8884
Length=1623961
Score = 93.3 bits (102), Expect = 1e-13
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943
|||| |||| ||||| |||| ||||||| ||||||||| ||||| ||||||||||||||
Sbjct 420180 ATATCAGGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGA 420121
Query 235944 TCAAAACCCAGCATCTCCA 235962
|| | |||| |||||||||
Sbjct 420120 TCGATACCCGGCATCTCCA 420102
>seq8875
Length=3622691
Score = 93.3 bits (102), Expect = 1e-13
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2929222 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2929281
Query 235950 CCCAGCATCTCCAT 235963
||| ||||||||||
Sbjct 2929282 CCCGGCATCTCCAT 2929295
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2934504 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2934445
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 2934444 CCCGGCATCTCCA 2934432
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2960177 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2960118
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 2960117 CCCGGCATCTCCA 2960105
>seq9327
Length=2071771
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 1929743 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1929684
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 1929683 CCCGGCATCTCCA 1929671
>seq9312
Length=955721
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 816583 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 816524
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 816523 CCCGGCATCTCCA 816511
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 883320 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 883261
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 883260 CCCGGCATCTCCA 883248
>seq9311
Length=451887
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 416416 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 416357
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 416356 CCCGGCATCTCCA 416344
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 432916 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 432975
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 432976 CCCGGCATCTCCA 432988
>seq9250
Length=2410210
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 92695 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 92636
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 92635 CCCGGCATCTCCA 92623
>seq9235
Length=1460364
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 1201387 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1201328
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 1201327 CCCGGCATCTCCA 1201315
>seq9238
Length=678974
Score = 86.0 bits (94), Expect = 2e-11
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836
|||| || || | || || || || || | || | ||| | || |||||||||||||
Sbjct 675662 ATCCTCCGGCACAGTGCTCGGCAGGTCTAGTTGACAACGATCTGTTCCATTGGCAAGCAA 675721
Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896
|||||||||| || ||| | || ||||| || || ||||||| ||| ||| ||||
Sbjct 675722 CAATTATGGGTCCGCCAGACAGTCCATATCAGGGAGGCATATTTGCCCTAACAATAGATT 675781
Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACA 54943
| ||| | ||| |||||||| || || | || |||||| | |||
Sbjct 675782 TCCCAGCATGTTACCCATTTAAGCCACCTGAAGTGGTTTTTGCAACA 675828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515068179022376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |