Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq8899 170 6e-37 seq8738 165 2e-35 seq9325 114 4e-20 seq8884 93.3 1e-13 seq8875 93.3 1e-13 seq9327 91.5 4e-13 seq9312 91.5 4e-13 seq9311 91.5 4e-13 seq9250 91.5 4e-13 seq9235 87.8 5e-12 seq9238 86.0 2e-11 >seq8899 Length=3132144 Score = 170 bits (188), Expect = 6e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140506 ACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 || |||||||||| | || ||||| || ||||| || ||||| || ||||| || || | Sbjct 384448 ACTTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGT 384507 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | || | || || ||||| || || || || || || ||||| ||||| || ||||| | Sbjct 384508 CCGAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTG 384567 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | ||||||||||| |||||||||||||| || || ||||| || |||| || || || | Sbjct 384568 GCGGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCT 384627 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| || | ||||| || || || ||||| || ||||||||||| Sbjct 384628 CGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq8738 Length=1280009 Score = 165 bits (182), Expect = 2e-35 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 |||| | |||||| || | | || || ||||| ||||||||||| || || || || | Sbjct 1177199 TTTAAAAACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGT 1177258 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||| || || || || |||||||| ||||| ||||||| Sbjct 1177259 AATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 1177318 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| ||||| || || |||||||| || || || ||||| ||||||| || || | Sbjct 1177319 CTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAG 1177378 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || | || | |||||||| || || || || || ||||| |||||| Sbjct 1177379 GCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434 Score = 163 bits (180), Expect = 9e-35 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || || ||||| ||||||||||| || || || || | Sbjct 1177427 TTTGCATTCCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGT 1177486 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||| || || || || |||||||| ||||| ||||||| Sbjct 1177487 AATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 1177546 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| ||||| || || |||||||| || || || ||||| ||||||| || || | Sbjct 1177547 CTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAG 1177606 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | |||||||| || || || || || ||||||||||| Sbjct 1177607 GCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661 >seq9325 Length=2359367 Score = 114 bits (126), Expect = 4e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| | ||||| || || || || || || || || || || | || || || || Sbjct 261115 AGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 261056 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||| ||||| | ||| |||||||| || ||||| || || || ||| Sbjct 261055 TCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 260996 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || || || || || | || || || || || || || || | ||| Sbjct 260995 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTC 260936 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || || || |||||||||||| Sbjct 260935 TTGCCAGTCAGCGTCTTCACGAAAATCTGCATT 260903 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 600926 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 600867 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 600866 CCCGGCATCTCCA 600854 >seq8884 Length=1623961 Score = 93.3 bits (102), Expect = 1e-13 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943 |||| |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||| Sbjct 420180 ATATCAGGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGA 420121 Query 235944 TCAAAACCCAGCATCTCCA 235962 || | |||| ||||||||| Sbjct 420120 TCGATACCCGGCATCTCCA 420102 >seq8875 Length=3622691 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2929222 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2929281 Query 235950 CCCAGCATCTCCAT 235963 ||| |||||||||| Sbjct 2929282 CCCGGCATCTCCAT 2929295 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2934504 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2934445 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2934444 CCCGGCATCTCCA 2934432 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2960177 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2960118 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2960117 CCCGGCATCTCCA 2960105 >seq9327 Length=2071771 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1929743 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1929684 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1929683 CCCGGCATCTCCA 1929671 >seq9312 Length=955721 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 816583 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 816524 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 816523 CCCGGCATCTCCA 816511 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 883320 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 883261 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 883260 CCCGGCATCTCCA 883248 >seq9311 Length=451887 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 416416 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 416357 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 416356 CCCGGCATCTCCA 416344 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 432916 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 432975 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 432976 CCCGGCATCTCCA 432988 >seq9250 Length=2410210 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| |||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 92695 GGGGGTGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 92636 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 92635 CCCGGCATCTCCA 92623 >seq9235 Length=1460364 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1201387 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1201328 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1201327 CCCGGCATCTCCA 1201315 >seq9238 Length=678974 Score = 86.0 bits (94), Expect = 2e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 54777 ATCCACCAACAAATTGTTCAGCTGGAGTAATAGATGATGATATTTTTCATTGGCAAGCAA 54836 |||| || || | || || || || || | || | ||| | || ||||||||||||| Sbjct 675662 ATCCTCCGGCACAGTGCTCGGCAGGTCTAGTTGACAACGATCTGTTCCATTGGCAAGCAA 675721 Query 54837 CAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATT 54896 |||||||||| || ||| | || ||||| || || ||||||| ||| ||| |||| Sbjct 675722 CAATTATGGGTCCGCCAGACAGTCCATATCAGGGAGGCATATTTGCCCTAACAATAGATT 675781 Query 54897 TTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACA 54943 | ||| | ||| |||||||| || || | || |||||| | ||| Sbjct 675782 TCCCAGCATGTTACCCATTTAAGCCACCTGAAGTGGTTTTTGCAACA 675828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515068179022376