Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9041 104 2e-17 >seq9041 Length=338010 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597 ||| | ||| |||| ||||| || | || | || ||||| || ||||| ||||| Sbjct 58779 ATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACATGGCACTACCCCCTTGCCAT 58838 Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657 | |||||| ||||| || ||||||| |||||||||||| | |||||||| ||| Sbjct 58839 TGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGGTCG 58898 Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | ||| | || |||| || || ||||| ||||| || ||| | ||||||| ||||| Sbjct 58899 GCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTACTCCTTGCTCACACACATG 58958 Query 34718 ATCGCTCATGTC 34729 || || || ||| Sbjct 58959 ATTGCCCACGTC 58970 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| || || ||||||| ||||||| | ||| || ||||| ||||| || || |||| Sbjct 58970 GACGTGGGCAATCATGTGTGTGAGCAAGGAGTAGCTTGCAATATTGAAGGGTACTCCTAG 58911 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 || | ||| |||| |||||||| | |||||||||||| ||||||| || ||||| || Sbjct 58910 TCCTACGTCGGCCGACCGTTGATACATCTGGCAGGACAGTTCCCCATCTGCTACGTAAAA 58851 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 |||| | ||||| ||||| || ||||| || | || | || ||||| || Sbjct 58850 TTGGGCCAAACAATGGCAAGGGGGTAGTGCCATGTTCGGAATGTCGATTGGATTCCATGC 58791 Query 6796 GCACATCACGAT 6807 || ||| | ||| Sbjct 58790 GCTCATGATGAT 58779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448208653338240