Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq9041 104 2e-17
>seq9041
Length=338010
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597
||| | ||| |||| ||||| || | || | || ||||| || ||||| |||||
Sbjct 58779 ATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACATGGCACTACCCCCTTGCCAT 58838
Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657
| |||||| ||||| || ||||||| |||||||||||| | |||||||| |||
Sbjct 58839 TGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGGTCG 58898
Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717
| ||| | || |||| || || ||||| ||||| || ||| | ||||||| |||||
Sbjct 58899 GCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTACTCCTTGCTCACACACATG 58958
Query 34718 ATCGCTCATGTC 34729
|| || || |||
Sbjct 58959 ATTGCCCACGTC 58970
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||| || || ||||||| ||||||| | ||| || ||||| ||||| || || ||||
Sbjct 58970 GACGTGGGCAATCATGTGTGTGAGCAAGGAGTAGCTTGCAATATTGAAGGGTACTCCTAG 58911
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
|| | ||| |||| |||||||| | |||||||||||| ||||||| || ||||| ||
Sbjct 58910 TCCTACGTCGGCCGACCGTTGATACATCTGGCAGGACAGTTCCCCATCTGCTACGTAAAA 58851
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795
|||| | ||||| ||||| || ||||| || | || | || ||||| ||
Sbjct 58850 TTGGGCCAAACAATGGCAAGGGGGTAGTGCCATGTTCGGAATGTCGATTGGATTCCATGC 58791
Query 6796 GCACATCACGAT 6807
|| ||| | |||
Sbjct 58790 GCTCATGATGAT 58779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448208653338240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |