Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9325 131 4e-25 seq8738 91.5 4e-13 >seq9325 Length=2359367 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | ||| || || ||||| || |||| ||||| |||| || ||| Sbjct 261124 CGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTA 261065 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| | || || || || || |||||||| Sbjct 261064 CGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCC 261005 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 261004 TCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGA 260945 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| |||||||| |||| || || | ||| | |||||| Sbjct 260944 GTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCATT 260903 >seq8738 Length=1280009 Score = 91.5 bits (100), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| | || ||| | | |||| ||||| |||| | | | |||||| Sbjct 1179132 CAGGACCAAGTGCATCGTTGATCCGTGCTGGATGTTGTAGTCGGAAATGATCCGCCCATC 1179191 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || |||||||| | || || ||||| || | ||||| || || Sbjct 1179192 TTCAAGCTGCTTTCCCGCGAAGATGATACGCTGCTGGTCCGGTGCTATACCCTCTCGCTC 1179251 Query 225621 TTGGATCTTTTGCTTCACAGCTTC--GATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 || ||| ||||||| | | | || || || |||| | ||||||| ||||||| Sbjct 1179252 TTCGAT--TTTGCTTTTTATATCCAAGACCGTCTCGGAGGCCACGACGTCTAGCGTGATC 1179309 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||||| |||| || || | || | ||||||||| Sbjct 1179310 GTCTTGCCGGTCAGTGTCTTCACAAAAATTTGCATTTT 1179347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192384640896848