Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 127 5e-24
seq9240 118 2e-21
seq8899 114 3e-20
seq9325 102 2e-16
>seq8738
Length=1280009
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| ||||||||||| || |||||||||||||| | | ||| | ||||||
Sbjct 1177450 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCT 1177509
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| || | |||||| || | | |||||| ||||| ||
Sbjct 1177510 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177569
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| |||| | |||| ||| ||| || || | || || ||
Sbjct 1177570 TGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTC 1177629
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| || ||||| ||||| | |||||| ||
Sbjct 1177630 TTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTT 1177664
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| ||||||||||| || |||||||||||||| | | || | ||||||
Sbjct 1177222 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCT 1177281
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| || | |||||| || | | |||||| ||||| ||
Sbjct 1177282 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 1177341
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| |||| | |||| ||| ||| || || | || || ||
Sbjct 1177342 TGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTC 1177401
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || ||||| ||||| | ||||||
Sbjct 1177402 TTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434
>seq9240
Length=943838
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| || || ||||| || || |||||||| |||| | || | |||||
Sbjct 630372 AGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCC 630431
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||||| || ||| || ||||| ||
Sbjct 630432 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 630491
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| |||| | | || || ||| || ||||| ||||| ||
Sbjct 630492 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 630551
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| |||||||| || || ||||||| |||||| ||
Sbjct 630552 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586
>seq8899
Length=3132144
Score = 114 bits (126), Expect = 3e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| || || || ||||| || ||||| || || |||||||| || | | || |
Sbjct 384462 AGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGG 384521
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || || || ||||||||||| || | ||| || || | || |||||||||
Sbjct 384522 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCC 384581
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || |||||||| || ||| |||| | |||| || ||| || ||||| ||
Sbjct 384582 TTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTG 384641
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || ||||| ||||| || |||||||| | |||||| ||
Sbjct 384642 ATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682
>seq9325
Length=2359367
Score = 102 bits (112), Expect = 2e-16
Identities = 151/211 (72%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || || || || ||||||||||| |||| | ||| | || || || |
Sbjct 261110 CAAG-TGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCA 261052
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| || |||||||| | | |||||| || | | || || ||||| || ||
Sbjct 261051 GCTGCTTT--CCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 260994
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || ||||| |||| | | |||| ||| ||| || || ||||| || || ||
Sbjct 260993 GATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTT 260934
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| || || ||||||||||| | |||||||
Sbjct 260933 GCCAGTCAGCGTCTTCACGAAAATCTGCATT 260903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153678998308232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |