Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9325 178 3e-39 seq9240 174 3e-38 seq8899 156 9e-33 seq8738 154 3e-32 seq9245 86.0 1e-11 seq9233 86.0 1e-11 seq9210 86.0 1e-11 seq9175 86.0 1e-11 seq8994 86.0 1e-11 seq8936 86.0 1e-11 seq8778 86.0 1e-11 seq8743 86.0 1e-11 seq8679 86.0 1e-11 seq1640 86.0 1e-11 >seq9325 Length=2359367 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || ||||| |||| || | || ||| || |||||||||||||| | Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || || ||||||||||| || || || ||| Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| || || ||| | ||||| |||||||||| ||||| Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||| ||||| || |||| ||||| ||||| ||||||||| Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCATT 260903 >seq9240 Length=943838 Score = 174 bits (192), Expect = 3e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || |||||||| | || || || || ||||||||||| | Sbjct 630356 ACCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 630415 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| || || || ||||| ||||||| ||| || ||||| ||| Sbjct 630416 CAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 630475 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || || | ||||| || ||||| | ||||| Sbjct 630476 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 630535 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || ||||||||||| | || || ||||| |||||||| || Sbjct 630536 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586 >seq8899 Length=3132144 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | || || || || ||||||||||| | Sbjct 384452 ACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA 384511 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||| ||||||||||| || || || ||||| ||||||| ||| ||||| || ||| Sbjct 384512 AAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGG 384571 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || || || || || || || | ||||| |||||||| | ||||| Sbjct 384572 AATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGAC 384631 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| || || | || || ||||| |||||||| || Sbjct 384632 CTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682 >seq8738 Length=1280009 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 ||||||| ||||| ||||| |||||||| | || || || ||||||||||| || | Sbjct 1177205 AACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCG 1177264 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 ||| || |||||||| || || || || ||||||||||| | ||| || || || | Sbjct 1177265 AAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAG 1177324 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||| || ||||| || || || | || || |||||||||| || | Sbjct 1177325 GGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAA 1177384 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || | ||||| ||||| || |||| ||||| ||||| || |||||| Sbjct 1177385 CCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| ||||| |||||||| | || || || ||||||||||| || | | Sbjct 1177435 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177494 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || || || ||||||||||| | ||| || || || || Sbjct 1177495 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177554 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || || | || || |||||||||| || || Sbjct 1177555 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACC 1177614 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105 || | ||||| ||||| ||||| | ||||| ||||| |||||||| || || Sbjct 1177615 TCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTTGAT 1177667 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 ||||| || |||| || | ||| | | | |||||||||||||| | || | || Sbjct 1179127 AGGCGCAGGACCAAGTGCATCGTTGATCCGTGCTGGATGTTGTAGTCGGAAATGATCCGC 1179186 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 ||||| || || || || || || ||||| | ||| || ||||| | |||||||| Sbjct 1179187 CCATCTTCAAGCTGCTTTCCCGCGAAGATGATACGCTGCTGGTCCGGTGCTATACCCTCT 1179246 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATC---GATAGTGTCCGAAGCTTCGACTTCGAGA 283058 |||| ||| ||||||||| |||| || || || || || |||| || || Sbjct 1179247 CGCTCTTCGAT-TTTGCTTTTTA--TATCCAAGACCGTCTCGGAGGCCACGACGTCTAGC 1179303 Query 283059 GTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||||||||| || |||| ||||| || || || |||||||| Sbjct 1179304 GTGATCGTCTTGCCGGTCAGTGTCTTCACAAAAATTTGCATTTT 1179347 >seq9245 Length=1646812 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 255633 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 255689 >seq9233 Length=3601930 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 548461 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 548405 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 548930 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 548874 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 550169 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 550113 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 551343 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 551287 >seq9210 Length=250497 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 49841 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 49897 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 51591 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 51647 >seq9175 Length=308091 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 119376 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 119320 >seq8994 Length=320926 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 247471 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 247415 >seq8936 Length=1869526 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 385813 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 385869 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1086390 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1086446 >seq8778 Length=62753 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 61991 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 61935 >seq8743 Length=814231 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 132614 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 132558 >seq8679 Length=336329 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 62549 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 62493 >seq1640 Length=1046 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 526 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046610558369168