Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 147 2e-30
seq9325 129 4e-25
seq9240 127 1e-24
seq8899 123 2e-23
>seq8738
Length=1280009
Score = 147 bits (162), Expect = 2e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | ||| | | ||||| || || || |||||| |||||||||||
Sbjct 1177428 TTGCATTCCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTA 1177487
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || || | || ||||||||||| ||||||||||| | ||||||||||||
Sbjct 1177488 ATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATC 1177547
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | || ||||| ||| ||||| ||||| | | || ||||| | |
Sbjct 1177548 TGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGG 1177607
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| ||| || ||||||||||| |||||||| ||||| || |||||
Sbjct 1177608 CTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
Score = 138 bits (152), Expect = 8e-28
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || || |||||| |||||||||||||| | || || | || |||
Sbjct 1177225 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCC 1177284
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | |||||||||||||| ||| | || ||||| |||
Sbjct 1177285 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177344
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | | || ||||||| ||| || ||||||
Sbjct 1177345 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTT 1177404
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||||||| ||||| ||||||||
Sbjct 1177405 CCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433
>seq9325
Length=2359367
Score = 129 bits (142), Expect = 4e-25
Identities = 161/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || ||||| ||||||||||| |||| || || |||| |||
Sbjct 261112 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 261053
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || |||||||||||||||||||||| || | ||| ||||| |||
Sbjct 261052 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 260993
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | |||| | |||||||| | | || ||||| | || || |||||
Sbjct 260992 ATCTTAGCCTTGAC-GTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTT 260934
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAA 44345
|| || || ||||||||||| || ||||| || |||
Sbjct 260933 GCCAGTCAGCGTCTTCACGAAAATCTGCATTCTGCGAA 260896
>seq9240
Length=943838
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| |||||| || || || |||||| || |||||||| |||| || ||| | ||
Sbjct 630371 CAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATC 630430
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||||||||| ||||| ||||||| ||||||||| || | || | || ||||| ||
Sbjct 630431 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 630490
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| |||||| ||||| | | || || || | || || ||||| | ||||| ||
Sbjct 630491 CTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGT 630550
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||||||||| || |||||||| |||||
Sbjct 630551 CTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq8899
Length=3132144
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || ||||||||||| || |||||| || |||||||| || | || ||
Sbjct 384462 AGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGG 384521
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||| ||||||| |||||| ||||||| || | ||||||
Sbjct 384522 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCC 384581
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| || ||| ||||| | | || ||||| | | || ||||| | ||
Sbjct 384582 TTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTG 384641
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || |||||||| |||||||| || |||||
Sbjct 384642 ATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359948316222264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |