Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq9135 114 2e-20 >seq9135 Length=816509 Score = 114 bits (126), Expect = 2e-20 Identities = 218/320 (68%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789 ||| ||| || || ||||||||||| || || || ||||| | ||||||||| || | Sbjct 23657 CGATTCATAGCAGTAGATTGAGCGGCACGAACTAAACCTTCTAGTTCAGCGCCACTAAAG 23716 Query 155790 TTTTTAGTTTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGAT 155849 |||||||| ||| | | || ||| || || || | ||||| | | || | || Sbjct 23717 TTTTTAGTCATTACGCCCAATTCGCGTAAATCAACATCCGGAGCTAGTTTTTT---AAAT 23773 Query 155850 T---TCATTTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAAT 155906 | ||||| | | || | | | ||| || | ||| || | ||| | ||||| Sbjct 23774 TCCTTCATTCGACGAGTATGGATTTGAAGAATCTGTATACGGCCATCTTCGTTGGGTAGG 23833 Query 155907 CCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCG 155966 | ||||| || | | |||||| || || || | ||||||||||| ||||| | || Sbjct 23834 CTGATTTCCATTTGAACTTCCAAACGACCTGGCCGCAATAATGCTTCATCAATCATATCT 23893 Query 155967 GGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTA 156026 ||||||| |||||||| || | | |||||| || || ||| ||||| || ||||| Sbjct 23894 CGTCTGTTCGTCATACCAATCACCAGAATGTTATTCAATTGTTCGACACCATCAATTTTT 23953 Query 156027 GACAATAATTGATTGACTAC 156046 | || ||||||||||| || Sbjct 23954 GCTAACAATTGATTGACAAC 23973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666995217683520