Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq68 113 5e-20
seq24 91.5 2e-13
>seq68
Length=961948
Score = 113 bits (124), Expect = 5e-20
Identities = 193/273 (71%), Gaps = 8/273 (3%)
Strand=Plus/Plus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994
|||||||| || ||||| ||||| | | |||||||||||| | ||| ||||| | ||
Sbjct 663329 TTCATGTACCGAATCTTGCCAAAAATCGCACGCTCCTTCCA-ACCCTGATCGTGTATGCC 663387
Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACT 119053
||| | | ||| | ||| || ||||| ||||| ||||| || || | ||| ||||
Sbjct 663388 TGCGATCGACCACATACAGCCGACGTACCCGTTCGGATCGCGCCCATCCAGACT-GTACC 663446
Query 119054 TATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAG 119111
||||| | ||||| | || || || ||| || || || || |||| |||||
Sbjct 663447 GGTCGTTCAGATAGAT--GGCCGTTTCGAGCGCTTCCTCGGGCGTTTTCGTCCACTCCAG 663504
Query 119112 TAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTG 119171
||| || || ||||| ||||| || | | | || ||||| || ||||| || | ||||||
Sbjct 663505 TATCTTCTTCGCCCAATACATCCGCAGAAAGCCATGCATCTTGCCCTCCTTCACCATCTG 663564
Query 119172 AAGTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204
|| || || | |||||| ||| ||||| ||
Sbjct 663565 CAGCTGGGCCGCGTTCCACAGATCGTCGTGCGT 663597
>seq24
Length=2206587
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| ||||| || ||||| | |||||| || ||| | |||||| || || |||||
Sbjct 1947926 ATGTACGTGTCGATCAGCAGCGAGTACATCTCACTGTGGACGTTCTCCATCGCAATCTGG 1947985
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| || |||||||| || ||||||| || || || ||| | || ||||| ||||
Sbjct 1947986 AAGCCGTAGAAGCAGCGCGCCTCCGTTACCTGCACCTCCTGGCTGAACCGTTCGACCAGA 1948045
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGC 16639
||||| |||||||||||||| || ||||| || |||| | ||||
Sbjct 1948046 TTCTCGTTCACGATACCGTCGGACGCGGCAAAGAAGGCCAGCACGTGC 1948093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511264996675720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |