Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq59 421 8e-113
seq24 96.9 4e-15
>seq59
Length=1145648
Score = 421 bits (466), Expect = 8e-113
Identities = 1214/1853 (66%), Gaps = 30/1853 (2%)
Strand=Plus/Plus
Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888
|| ||||| || || ||||||||||| |||||||| || || | |||| ||||||||
Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825
Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948
|| || ||| || ||| ||| |||| || || | || || || | |||||
Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885
Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008
|||||||| || || |||| ||| |||||||| || ||| ||| || | ||| |||
Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCTTAATGCACGTTTTAACCGAAATCTCC 140945
Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT--GAATAGAT 53065
|| | ||||| || | |||| || | |||| | | | || || || |||| |||
Sbjct 140946 CACACCGTTTTGTACAGATCGCGTATTTCCTTCGGTATCGATTCGATGCTTTGAATCGAT 141005
Query 53066 CCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 53125
|| | || ||| ||||| || || || ||| | || | || |||
Sbjct 141006 CCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCTGTCAAA 141065
Query 53126 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 53185
|| || ||||| | || || || ||||| || || || | ||| | |||| |||||
Sbjct 141066 TCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTGTAA 141125
Query 53186 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 53245
| || || |||||||| | ||||| || || ||||| ||||| || || || ||
Sbjct 141126 ACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAAGCG 141185
Query 53246 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 53305
|| ||||| ||||||| || | ||| | | |||| || ||||| || ||
Sbjct 141186 GTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCCTTC 141245
Query 53306 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 53365
| ||||||||||||||||||||||| | || || ||
Sbjct 141246 AACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCAGGATG 141305
Query 53366 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424
|| || || | | || ||| | || || ||||| ||||| || | || | ||
Sbjct 141306 CCTTTGCTTACCGGACTC-CCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTC 141364
Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484
||| ||||| || ||||| ||||| || || |||||||| || | | || || | |||
Sbjct 141365 ACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCTTTTG 141424
Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544
|| ||| ||| || | ||||| | | ||| ||||| || || | || |||||
Sbjct 141425 GGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCCTGAAC 141484
Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 53604
||| |||||||| || || || | | | || ||| | || || || | ||||| ||
Sbjct 141485 ACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGATAGTA 141544
Query 53605 ATTAATATCTATAATTTTATTGAGGTTTCT-GACAATTACTTTGACCACATCCTTCAGTT 53663
|| ||||| |||||||| || || || | | ||| ||| | | ||||||||||| |
Sbjct 141545 GTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCG-CGACATCCTTCAGCT 141603
Query 53664 TGAGAAAATCAAA----TTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGA 53719
|| ||| || | |||||| | | ||||||||||||| || || || |||| |
Sbjct 141604 TGGCAAAGTCGTACGTTTTGTCCGGTT-TCACAAACATGTTCAGCGCGATCGAGGCCAAA 141662
Query 53720 TTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTAC 53777
|| || || |||| |||| | || || || | | |||||| || || |||||
Sbjct 141663 TTGCACACCGCTATTTCATC--CTTCGACGAGTACTCCACTATCTCGGTACACAGATTGG 141720
Query 53778 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 53837
|||||| ||||| || | || || ||||| ||||| ||| ||||||||||| || |
Sbjct 141721 AACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTACA 141780
Query 53838 GAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAG 53897
| ||| | || || ||||| | ||| ||||| || || || ||| | | | | |
Sbjct 141781 GCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTCCTGTG 141840
Query 53898 CCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTAT--AGTGTATACAATCGTTCA 53953
|||| | | | || || ||| | ||||| |||||| | || ||
Sbjct 141841 CCTTCACCT--GGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTC--TCG 141896
Query 53954 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 54013
||||| || |||||| | ||||||| || || || | || ||||||| ||||
Sbjct 141897 AACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCAC 141956
Query 54014 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 54073
| ||| ||| ||| || | ||| || ||||| || ||||| || || || |
Sbjct 141957 ATTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATG 142016
Query 54074 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 54133
|| | || | ||||| || || || || || || ||||| || ||| | | |||
Sbjct 142017 TCGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATA 142076
Query 54134 TCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 54193
|| ||||| ||||| | ||| |||| | | || ||||| ||||| || ||||||
Sbjct 142077 TCCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGA 142136
Query 54194 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCA 54253
|| | ||| | || ||||| || ||||| | || ||| || | | || || ||
Sbjct 142137 TCCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATC 142196
Query 54254 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTA 54311
||||| || |||||||| || |||| |||| ||||| | | | || | | || |
Sbjct 142197 CCATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGAATGCAGTGCACGTTCA--GCCCGA 142254
Query 54312 TCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 54371
| || || ||| ||| || || | ||| || | |||| |||||| || || ||||| |
Sbjct 142255 TACCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCCTCAA 142314
Query 54372 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431
|||| || ||| |||| |||| ||||| || || | || |||| || | |
Sbjct 142315 TACTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTAGCGG 142374
Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 54491
| ||| | ||| || || || || ||||| | || ||||| |||||||||||||
Sbjct 142375 CCGCAAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGGAAAGCAGATTGTACGTCT 142434
Query 54492 CGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550
|||| || | || || || || | ||||| || | || || ||||| | ||||||
Sbjct 142435 CGATGGCAGCATCAATGTCTTCACCG-TGAATACCGATGGCAACGCGCATCAGCATGTGT 142493
Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610
|| |||| || || ||||| || || |||||||| ||||| |||| |||||
Sbjct 142494 TGCGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTCCAGTGTTTTG 142553
Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663
|| || ||||||||||| || || || |||||||| || | ||||| ||
Sbjct 142554 AAGCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGATGGCCGAGTTCAG 142606
>seq24
Length=2206587
Score = 96.9 bits (106), Expect = 4e-15
Identities = 177/258 (69%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 24123 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 24182
|| ||||||| || |||||||| || || | |||||||| || ||| | |||||
Sbjct 1947559 TTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAGCTCGTTC 1947618
Query 24183 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 24242
|| || || || || ||||| ||||||||||| || ||||| || |||||||||||
Sbjct 1947619 GAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGCTG 1947678
Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCA----TAACC 24298
|| ||||| || || || || || ||||| || | | | || ||| || ||
Sbjct 1947679 CCGCTGAAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAAAGTTAGCC 1947738
Query 24299 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 24358
| || | ||||| || | ||||| || |||||||| || || || || | ||
Sbjct 1947739 TTCTTGCTCGAG-ATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTTCACGCACGGTAGCGT 1947797
Query 24359 CTCTATAGCATTAAAGAG 24376
|| || |||||||| ||
Sbjct 1947798 TTCGATGGCATTAAACAG 1947815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593548151656080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |