Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq66 109 6e-19 >seq66 Length=971934 Score = 109 bits (120), Expect = 6e-19 Identities = 235/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| || |||| ||| | ||||||||| || ||||| || |||||||| ||| Sbjct 654120 AGTCCAGTGACATGCGCGATCATATGGGTCAGCAGTGAATAGCTAGCGATGTTGAACGGC 654061 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || |||| || | || |||| ||||| |||| |||||||||||| || || | || Sbjct 654060 ACGCCCAATCCAACATCGGCCGATCGCTGATACATCTGGCAGGAGAGTTCTCCATCAGCA 654001 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||| | ||||| || ||| || || |||| |||||| ||| | ||| | || Sbjct 654000 ACGAAAAACTGTGCCAAACAGTGACACGGTGGCAATGCCATGATGGGAATGTCGGAAGGA 653941 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 ||||| ||| | | | || | | | || | || || |||||||| | |||| Sbjct 653940 TTCCAAGCGCTCATAATGATACGAC-GATCGTACGGATTGTTCTTGATCGTGTCGATCAC 653882 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGG-AGTCCACGTACGCGG 146047 | | ||| || | |||||||| |||||| ||| ||| | |||||| | Sbjct 653881 CTTTGCCAACTGATCGATTCCCTGCCCTGTGTAATC-GTCGTGGCATGTTTTGTACGCTG 653823 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | || ||||| | ||||||||| ||||| || || || | ||| || Sbjct 653822 CACCAAAGTGGCGCCACTGGAAACCGTAAACCGGTCCTAAGTCACC 653777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589904416438840