Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq66 107 1e-18 >seq66 Length=971934 Score = 107 bits (118), Expect = 1e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||||||| ||||||||| || | || ||||||||||| ||||| || ||||| | Sbjct 654116 CAGTGACATGCGCGATCATATGGGTCAGCAGTGAATAGCTAGCGATGTTGAACGGCACGC 654057 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | | ||| | ||| || |||| ||||| | ||| ||||| || | ||||||| || Sbjct 654056 CCAATCCAACATCGGCCGATCGCTGATACATCTGGCAGGAGAGTTCTCCATCAGCAACGA 653997 Query 97235 AAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTC 97293 ||||||| ||| ||| ||||| || ||||| ||||| | |||| || | |||| Sbjct 653996 AAAACTGTGCCAA-ACAGTGACACGGTGGCAATGCCATGATGGGAATGTCGGAAGGATTC 653938 Query 97294 CAAGCACACAT 97304 ||||| | ||| Sbjct 653937 CAAGCGCTCAT 653927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346685224104470