Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq68 138 2e-27 >seq68 Length=961948 Score = 138 bits (152), Expect = 2e-27 Identities = 216/306 (71%), Gaps = 5/306 (2%) Strand=Plus/Minus Query 189429 AAGCGG---AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAG 189485 |||||| |||| || || ||| ||||||||| | || |||||||||||| || | Sbjct 663608 AAGCGGCCAAAACGCACGACGATCTGTGGAACGCGGCCCAGCTGCAGATGGTGAAGGAGG 663549 Query 189486 GAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAA 189545 | || |||||| | ||| | || ||||||||||| ||||||||||| || ||||| | || Sbjct 663548 GCAAGATGCATGGCTTTCTGCGGATGTATTGGGCGAAGAAGATACTGGAGTGGACGAAAA 663489 Query 189546 CACCTGAAGACGCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGGC 189604 | || || || || | | | | |||||| ||||| || |||| || || || Sbjct 663488 CGCCCGAGGAAGCGCT-CGAAACGGCCATCTATCTGAACGACCGGTACAGTCTGGATGGG 663430 Query 189605 ACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCG 189664 ||||| ||||| ||||| || ||||||||||| || || |||||||| | Sbjct 663429 CGCGATCCGAACGGGTACGTCGGCTGTATGTGGTCGATCGCAGGCATACACGATCAGGGT 663370 Query 189665 TGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAG 189724 ||||| || | |||| ||||| ||||| | || ||||| |||||| | | ||| Sbjct 663369 TGGAAGGAGCGTGCGATTTTTGGCAAGATTCGGTACATGAACTATGAGGGATGCAAGCGC 663310 Query 189725 AAATTT 189730 |||||| Sbjct 663309 AAATTT 663304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922927099594840