Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq68 138 2e-27
>seq68
Length=961948
Score = 138 bits (152), Expect = 2e-27
Identities = 216/306 (71%), Gaps = 5/306 (2%)
Strand=Plus/Minus
Query 189429 AAGCGG---AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAG 189485
|||||| |||| || || ||| ||||||||| | || |||||||||||| || |
Sbjct 663608 AAGCGGCCAAAACGCACGACGATCTGTGGAACGCGGCCCAGCTGCAGATGGTGAAGGAGG 663549
Query 189486 GAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAA 189545
| || |||||| | ||| | || ||||||||||| ||||||||||| || ||||| | ||
Sbjct 663548 GCAAGATGCATGGCTTTCTGCGGATGTATTGGGCGAAGAAGATACTGGAGTGGACGAAAA 663489
Query 189546 CACCTGAAGACGCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGGC 189604
| || || || || | | | | |||||| ||||| || |||| || || ||
Sbjct 663488 CGCCCGAGGAAGCGCT-CGAAACGGCCATCTATCTGAACGACCGGTACAGTCTGGATGGG 663430
Query 189605 ACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCG 189664
||||| ||||| ||||| || ||||||||||| || || |||||||| |
Sbjct 663429 CGCGATCCGAACGGGTACGTCGGCTGTATGTGGTCGATCGCAGGCATACACGATCAGGGT 663370
Query 189665 TGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAG 189724
||||| || | |||| ||||| ||||| | || ||||| |||||| | | |||
Sbjct 663369 TGGAAGGAGCGTGCGATTTTTGGCAAGATTCGGTACATGAACTATGAGGGATGCAAGCGC 663310
Query 189725 AAATTT 189730
||||||
Sbjct 663309 AAATTT 663304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922927099594840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |