Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq57 86.0 5e-12 >seq57 Length=1190389 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || |||| ||||| || ||||| || |||||||||||||| | | Sbjct 631298 CCACCGCGGAGTCGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGAC 631357 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||| |||| || ||||| || |||| || | || ||||| || Sbjct 631358 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGA 631417 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | ||| || | | | ||||| |||||| Sbjct 631418 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 631477 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| |||||| | |||||||| | |||||| || ||||| ||||| Sbjct 631478 TCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 631524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379235949907395