Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq66 127 4e-24 >seq66 Length=971934 Score = 127 bits (140), Expect = 4e-24 Identities = 230/331 (69%), Gaps = 4/331 (1%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || || || ||||| || ||||| ||||| ||||| || |||||||| | || | || Sbjct 653777 GGTGACTTAGGACCGGTTTACGGTTTCCAGTGGCGCCACTTTGGTGCAGCGTACAAAACA 653836 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || |||||| || || |||| || ||||| ||||| || | | | || | Sbjct 653837 TGCCACGACGATTACACAGGGCAGGGAATCGATCAGTTGGCAAAGGTGATCGACACGATC 653896 Query 35516 AGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCA 35574 | |||| ||||| | ||| | | || ||||||| || ||||||||| || ||| Sbjct 653897 A-AGAACAATCCGTACGATCGTCGTATCATTATGAGCGCTTGGAATCCTTCCGACATTCC 653955 Query 35575 CCTTATGGCTCTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAAT 35633 | | ||||| | || || || ||| || || | || |||| || ||| |||||||| Sbjct 653956 CATCATGGCATTGCCACCGTGTCAC-TGTTTGGCACAGTTTTTCGTTGCTGATGGAGAAC 654014 Query 35634 TGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTG 35693 | || |||||| ||||||||||| | ||||| || ||||||||||| ||||| || | Sbjct 654015 TCTCCTGCCAGATGTATCAGCGATCGGCCGATGTTGGATTGGGCGTGCCGTTCAACATCG 654074 Query 35694 CATCATACTCTCTTCTGACTCATCTGATGGC 35724 | || || || ||||| ||| |||| || Sbjct 654075 CTAGCTATTCACTGCTGACCCATATGATCGC 654105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989287678039305