Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq54 84.2 2e-11 >seq54 Length=1283538 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGG 33623 || || ||| |||| ||||| |||||||| ||| | |||| | |||| || |||||||| Sbjct 262522 CGTATTCCACAGATTGGCGATAAGTTTGCCTCGCGCCACGGAC-AGAAAGGTACGTGCGG 262464 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || |||| |||| ||| |||||||| || ||| ||| | |||||| | | Sbjct 262463 TATTCAGTACCGCCAGGAGGATATGCCGTTTACCTGCGAGGGCATTACGCCGGACATTAT 262404 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||||| || |||| || || ||||| Sbjct 262403 CATCAACCCGCACGCTATCCCGTCCCGTATGAC 262371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356132132536513