Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 4e-14
>seq24
Length=2206587
Score = 93.3 bits (102), Expect = 4e-14
Identities = 269/411 (65%), Gaps = 6/411 (1%)
Strand=Plus/Plus
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
||| || || || || | ||| | || || |||||||| |||||||| ||| | |||
Sbjct 1947381 ACAGCCCAACTCCAGCAGCAAACGATCCGCCACAAACTCAATGTACTGCGACATCAGATC 1947440
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATC 13080
||| ||||| || | | | || |||| |||| || ||||| | || || || |
Sbjct 1947441 ACAATTCATGCCGAGCATATCGACCGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCAC 1947500
Query 13081 AACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATT-TGAT--AGATG 13137
|| || ||| | || || | | || ||| | ||| || || ||||
Sbjct 1947501 TACCGCATCGCGGATGATCTCCGTCA---CGCGCTCCTTCGAAGGCTTCTGCACCAGATA 1947557
Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197
||| ||||||| || || |||||||| |||||||| || || || || ||||||||
Sbjct 1947558 CTTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAGCTCGTT 1947617
Query 13198 TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257
|| || || |||||||||||||| || || || || | ||| || || | |||||
Sbjct 1947618 CGAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGCT 1947677
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACT 13317
|| || || || || || || || ||||| || | || | || ||| | ||
Sbjct 1947678 GCCGCTGAAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAAAGTTAGC 1947737
Query 13318 ATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCA 13368
|| || ||| ||||| || ||||||| ||| || | || |||||
Sbjct 1947738 CTTCTTGCTCGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTTCACGCA 1947788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430859641532142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |