Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq65 105 6e-18 >seq65 Length=973771 Score = 105 bits (116), Expect = 6e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG 5380 ||||| || | ||| || || | || |||||||| || || || || | || Sbjct 655017 TCGCAAATAAACTGTGCGATACGATCGCCCTTCTTCACTTCGAAATCCGCCTCAGCGTGA 655076 Query 5381 TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACG 5440 || |||||||| || || |||||||| |||||||| || |||| ||||| || || ||| Sbjct 655077 TTGAACAGCACGACGCCAACATTGCCGCGGTAGTCCTCATCGACGACGCCGGCTCCAACG 655136 Query 5441 TCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 ||||| || | ||| || || | ||||||||||| |||| ||||||||||| || Sbjct 655137 TCGATGAAATTTTTCACGGCCAACCCGGAACGTGGAGCTACCCGTCCGTAGCATCC 655192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447619595317520