Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq65 143 2e-29
>seq65
Length=973771
Score = 143 bits (158), Expect = 2e-29
Identities = 234/337 (69%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562
||| || || ||||| || || || || | ||||| || || ||| | ||||||
Sbjct 654935 GCCGGTCGATCCGAAACCTCCCGCACCGCGCTCCGTGTCCGTTAGCGACGGAAGCTCTTC 654994
Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622
|| || || | ||| |||||| || | ||| || || || |||||| |||| ||
Sbjct 654995 CAGGTCAGGATAGGCAATCTTCTCGCAAATAAACTGTGCGATACGATCGCCCTTCTTCAC 655054
Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682
|||||||| | || ||||||||||| ||||| || |||||||||||||| |
Sbjct 655055 TTCGAAATCCGCCTCAGCGTGATTGAACAGCACGACGCCAACATTGCCGCGGTAGTCCTC 655114
Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742
|| | ||||| || || ||||||||||| | || || |||| ||||| || |||||
Sbjct 655115 ATCGACGACGCCGGCTCCAACGTCGATGAAATTTTTCACGGCCAACCCGGAACGTGGAGC 655174
Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG 5802
|| || |||||||| || ||||| | ||| | ||| | ||| || | ||||| | |
Sbjct 655175 TACCCGTCCGTAGCATCCTTCGGGCACCTGCACCTGGATGTCGGTCATCACCAGTTGTTT 655234
Query 5803 ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGCAG 5839
|| | | |||||| | ||||| | |||||| ||
Sbjct 655235 GCCACGGCCGGGGACGGTATAGTCGTACGCGCTGAAG 655271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429931905858152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |