Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq24 91.5 2e-13 >seq24 Length=2206587 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/227 (70%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 21464 TTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTA 21523 || ||||||| || || |||||||||||||| || || ||||| || | || || Sbjct 1947559 TTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAGCTCGTTC 1947618 Query 21524 GAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAA--TG 21581 || || || | ||| ||||| | || | ||| || | ||| || || |||||||| || Sbjct 1947619 GAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGCTG 1947678 Query 21582 CTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641 | ||| ||||| || ||||| |||||||||||||| || | || || || | ||| Sbjct 1947679 CCGCTG--AAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAAAGTTAG 1947736 Query 21642 -ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTT-TTCTT 21686 ||||| | | | ||||| || ||||| | |||||| ||||| Sbjct 1947737 CCTTCTTGCT-CGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTT 1947782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531745411830040