Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq24 91.5 2e-13
>seq24
Length=2206587
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/227 (70%), Gaps = 7/227 (3%)
Strand=Plus/Plus
Query 21464 TTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTA 21523
|| ||||||| || || |||||||||||||| || || ||||| || | || ||
Sbjct 1947559 TTGAACATCAGGCAGGCGAAATCACAATGCAATCCCTCGTCCCTCGAAATCAGCTCGTTC 1947618
Query 21524 GAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAA--TG 21581
|| || || | ||| ||||| | || | ||| || | ||| || || |||||||| ||
Sbjct 1947619 GAGAAGGTAAGACCCGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGACGCAAAGCTG 1947678
Query 21582 CTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641
| ||| ||||| || ||||| |||||||||||||| || | || || || | |||
Sbjct 1947679 CCGCTG--AAGAAGATACCCTCGACGGCAGCAAATGCGACCACACGCTCGCCAAAGTTAG 1947736
Query 21642 -ATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTT-TTCTT 21686
||||| | | | ||||| || ||||| | |||||| |||||
Sbjct 1947737 CCTTCTTGCT-CGAGATCCAGTTAAGCGCCCAGTCTGCCTTCTTCTT 1947782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531745411830040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |