Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq59 219 1e-51 seq66 114 3e-20 >seq59 Length=1145648 Score = 219 bits (242), Expect = 1e-51 Identities = 707/1080 (65%), Gaps = 22/1080 (2%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| ||| | ||||| || || ||||| || ||| | ||||| ||||| || ||||| Sbjct 142522 ATCAAGGGTAAGATTGTGGAGCGACCGCAACACATGCTGATGCGCGTTGCCATCGGTATT 142463 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 || | || ||||||| || || || || || || || || | || || Sbjct 142462 CACGGTGAAGACATTGATGCTGCCATCGAGACGTACAATCTGCTTTCCGAGCGCTACTTT 142403 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || || ||| | || || |||| || | || | ||| ||| | || |||||| Sbjct 142402 ACCCATGCCTCACCGACCATGTTTGCGGCCGCTACGCAGCGTCCGCAGCTTTCGTCTTGC 142343 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || | ||| |||||| || |||||||| | || || || ||| | ||| Sbjct 142342 TTTCTGCTTACCATGTCGGACGACAGTATTGAGGGTATTTACGATACGCTAAAGCAGTGT 142283 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG-CAC 363727 || || |||||||| || ||||| || || | | || | ||| |||| | || Sbjct 142282 GCACTGATTTCCAAATCGGCCGGCGGTATCGGGCTGAACG-TGCACTGCATTCGCGCCAA 142224 Query 363728 AGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || | | ||||| |||||| | ||||| ||||| ||| |||| || ||||| || Sbjct 142223 AGGA-ACGTACATCTCCGGCACGAATGGGAT-TTCGAACGGGTTGGTGCCGATGCTGCGC 142166 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || | |||| || || ||||||| || |||||||| ||||| || || ||| Sbjct 142165 GTTTACAACAACACGGCCCGGTACGTGGATCAGGGTGGCAACAAGCGGCCCGGCGCCTTT 142106 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || || || ||||| || || | ||||| || |||||||| || || ||||||| Sbjct 142105 GCCATCTACCTCGAACCATGGCACGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAAC 142046 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||||| ||||||| || || ||||||| || || ||| | | || | Sbjct 142045 ACCGGCAAGGAGGAGGTGCGTGCCCGCGACATGTTCTACGCCCTGTGGATCCCGGATCTG 141986 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||| |||| |||||||| | | ||| ||| || | ||||||||||| || | Sbjct 141985 TTCATGCAGCGTGTGGAGGC--GAACGAAATGTGGAGCCTGATGTGCCCACACGACTGCC 141928 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | || | | || ||||| || || | | || ||| ||| || || Sbjct 141927 CCGGATTGGCTGACACTTGGGGCGAAGAGTTCGAGAAGCTGTACACTGGGTACGAGCAGG 141868 Query 364085 AGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 |||| | | || | || | |||||| | ||||||||||||||||| || ||| Sbjct 141867 AGGG-TCGATTTATACGCCAGGTGAAGGCACAGGACCTATGGTTTGCCATCATCGAATCG 141809 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 ||| | || || || || || ||| ||||||| ||| |||||||||||||| ||| Sbjct 141808 CAGGTGGAAACGGGCGTTCCGTACATGCTGTACAAGGATGCGTGCAACCGCAAGAGCAAT 141749 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||| || | || || || || ||| || ||||||||||| | || ||| | Sbjct 141748 CAGCAGAACATCGGCACCATAAAGTGTTCCAATCTGTGTACCGAGATAGTGGAGTACTCG 141689 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA 364323 | || || | || || || || | || ||||||||||| |||||| ||| Sbjct 141688 TCGAAGGATGAAATAGCGGTGTGCAATTTGGCCTCGATCGCGCTGAACATGTTTGTGAAA 141629 Query 364324 ---GATGGTACTTTTGAC--CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA 364378 || || | ||| ||| | || | || || | | | || ||| Sbjct 141628 CCGGACAAAACGTACGACTTTGCCA--AGCTGAAGGATGTCGCGAAGATTTTGACGCGCA 141571 Query 364379 ATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATA 364438 |||| |||| ||||||| | || || |||||| | || || || |||| || || | Sbjct 141570 ATCTGAACAAAATTATCGATATAAACTACTATCCAGTACCGGAGGCGAAGCGCTCCAACA 141511 Query 364439 TGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTT-TTTATGATGC 364495 |||| || | ||||| ||| | ||||| |||||| | || || |||| || |||||| Sbjct 141510 TGCGGCACAGGCCGATCGGTATCGGTGTTCAGGGCATGGCCGATGCGTTCATTTTGATGC 141451 >seq66 Length=971934 Score = 114 bits (126), Expect = 3e-20 Identities = 223/323 (69%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | ||||| |||||||| || || ||||||||||||||||||| ||||||| Sbjct 653776 AGGTGACTTAGGACCGGTTTACGGTTTCCAGTGGCGCCACTTTGGTGCAGCGTACAAAA- 653834 Query 111548 CATG-CACGACTCATATGATTCA---CAGGGAACTGATCAATTACAGAATGTCATTGATC 111603 |||| |||||| || | || ||||||| ||||| || || || || || Sbjct 653835 CATGCCACGAC---GATTACACAGGGCAGGGAATCGATCAGTTGGCAAAGGTGATCGACA 653891 Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATG-CA 111662 || |||||||| || |||||| || |||||||| || ||||| || | || Sbjct 653892 CGATCAAGAACAATCCGTACGATCGTCGTATCATTATGAGCGCTTGGAATCCTTCCGACA 653951 Query 111663 TTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGG 111722 || | |||||| | ||||| ||||| | || ||||||| || || || Sbjct 653952 TT-CCCATCATGGCATTGCCACCGTGTCACTGTTTGGCACAGTTTTTCGTTGCTGATGGA 654010 Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782 || || ||||| |||||||||||||| || ||| |||| | || || ||||| || Sbjct 654011 GAACTCTCCTGCCAGATGTATCAGCGATCGGCCGATGTTGGATTGGGCGTGCCGTTCAAC 654070 Query 111783 ATTGCAAGTTACGCACTACTTAC 111805 || || || || |||| || || Sbjct 654071 ATCGCTAGCTATTCACTGCTGAC 654093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302963322576122