Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq101 93.3 9e-14
seq127 91.5 3e-13
seq108 91.5 3e-13
seq49 91.5 3e-13
seq48 91.5 3e-13
seq12 91.5 3e-13
seq11 91.5 3e-13
seq7 91.5 3e-13
seq6 91.5 3e-13
seq1 91.5 3e-13
seq10 89.7 1e-12
>seq101
Length=540153
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 528831 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 528772
Query 142564 CCCACATCGGGCAGAAGT 142581
||||| | |||| |||||
Sbjct 528771 CCCACGTTGGGC-GAAGT 528755
>seq127
Length=317029
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 116133 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 116074
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 116073 AGCCCCACGTTGGGC 116059
>seq108
Length=479664
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 349257 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 349198
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 349197 CCCCACGTTGGGC 349185
>seq49
Length=1325362
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 190186 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 190127
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 190126 CCCCACGTTGGGC 190114
>seq48
Length=1332325
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 863093 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 863152
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 863153 CCCCACGTTGGGC 863165
>seq12
Length=3035404
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 2956021 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2956080
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 2956081 CCCCACGTTGGGC 2956093
>seq11
Length=3233111
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1718731 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1718672
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1718671 CCCCACGTTGGGC 1718659
>seq7
Length=4015228
Score = 91.5 bits (100), Expect = 3e-13
Identities = 240/360 (67%), Gaps = 16/360 (4%)
Strand=Plus/Minus
Query 218656 AAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAG 218715
||||| || ||| | |||| | || | |||| || | ||||| ||||||||||||
Sbjct 169235 AAGGTGGCCCAGCTGGCTGGATCGGTGGCAGAAAAGTCGGCGTACCACCACGGTGAGCAG 169176
Query 218716 AG--TCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGA 218773
||||| |||| | | |||| ||| | || || ||||| |||||||| |
Sbjct 169175 TCGCTCTGCTCCA--CCATCATCAACCTGGCGCAGAATTACGTCGGCAGCAACAACATCA 169118
Query 218774 ACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTT 218833
|| ||||| || ||| ||||||||| | || || || ||||||||||||||
Sbjct 169117 ACCTGCTGTATCCGGGCGGCCAGTTTGGTACGCGCCTGACCGGCGGAAAGGATAGTGC-- 169060
Query 218834 CTGCC--AGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGC 218891
| ||| ||||| ||||| || | | ||||| |||||||||| | || | | |
Sbjct 169059 CAGCCCGAGGTACATCTTCACCATGATGTCGGTGCTGACGCGCCACATCTTTCACCCGCT 169000
Query 218892 CGATGATGTGCTCCTTAAGTATC---TTGAGGACGATGGTTCTTCG-ATTGAGCCCGAGT 218947
|| ||| ||| || |||| | | |||||| | || || || || || | ||
Sbjct 168999 GGACGATCCGCTGCTCGAGTACCAGTTCGAGGACAA----TCAGCGCATCGAACCGGTGT 168944
Query 218948 GGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007
||||| |||| |||||| | |||| | || ||||| | |||||||| || ||||
Sbjct 168943 GGTATTTGCCCATCATTCCGATGCTGCTGATCAACGGTGCGGAAGGTATCGGTACCGGGT 168884
>seq6
Length=4219845
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 2661799 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2661740
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 2661739 CCCCACGTTGGGC 2661727
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2665518 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2665577
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2665578 CCCACGTTGGGC 2665589
>seq1
Length=5975090
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4303771 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4303712
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 4303711 CCCCACGTTGGGC 4303699
>seq10
Length=3481139
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 615048 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 614989
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 614988 CCCACGTTGGGC 614977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027529023585011
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |