Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19] 23,371 sequences; 221,324,304 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq68 147 2e-30 seq6 95.1 1e-14 >seq68 Length=961948 Score = 147 bits (162), Expect = 2e-30 Identities = 209/289 (72%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 37821 GCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAG 37880 ||| | |||||||| ||||||||||||| || | ||| | ||| ||||| ||| Sbjct 663603 GCCAAAACGCACGACGATCTGTGGAACGCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAG 663544 Query 37881 ATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCT 37940 |||||| | | |||| ||||||||| ||||| || |||| ||| | || | || Sbjct 663543 ATGCATGGCTTTCTGCGGATGTATTGGGCGAAGAAGATACTGGAGTGGAC-GAAAACGCC 663485 Query 37941 C-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGA 37999 | || |||||| | ||||| ||||| || || |||||| |||| ||||| || Sbjct 663484 CGAGGAAGCGCTCGAAACGGCCATCTATCTGAACGACCGGTACAGTCTGGATGGGCGCGA 663425 Query 38000 TCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGC 38058 ||| ||||| |||||||||||| ||||||| || || ||| |||||||| | ||| Sbjct 663424 TCCGAACGGGTACGTCGGCTGTATGTGGTCGATC-GCAGGCATACACGATCAGGGTTGGA 663366 Query 38059 GCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| | | |||| ||||||||||||||||||||||| | ||||| Sbjct 663365 AGGAGCGTGCGATTTTTGGCAAGATTCGGTACATGAACTATGAGGGATG 663317 >seq6 Length=4219845 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||||||||| || ||||||||| |||||||| || | | Sbjct 2100919 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2100978 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| ||||| ||||| || ||||| |||||||||||| ||| Sbjct 2100979 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 2101038 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 2101039 ATGCCCTCCTTGTCC 2101053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396949303103542