Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq59 116 4e-21
seq72 96.9 4e-15
seq7 82.4 9e-11
>seq59
Length=1145648
Score = 116 bits (128), Expect = 4e-21
Identities = 629/986 (64%), Gaps = 27/986 (3%)
Strand=Plus/Plus
Query 113948 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTG 114007
|||| |||||| || || ||| |||| ||||||||||||||||| || || || || ||
Sbjct 141129 TTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAAGCGGTA 141188
Query 114008 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGA 114065
||||| ||||||| || || || |||| || | ||| | ||| |||||| |
Sbjct 141189 GGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGC--AATTTTTTCCTTCA 141246
Query 114066 GGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 114123
|| |||| | | || | | || ||| || |||||| || |||| |||||
Sbjct 141247 ACTCGGCCCAATTCCAAAGATCCGACG-GT-TCCTTCTTCCACATTTCGTACTGCAGGAT 141304
Query 114124 ACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC 114183
|||| | | || || || | || ||||| || || || | ||||| ||
Sbjct 141305 GCCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAACTC 141364
Query 114184 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 114243
||||||| || | ||| ||| || ||||| || ||||| | |||| || ||
Sbjct 141365 ACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCA--GCTTT 141422
Query 114244 --GGCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTG 114300
|||||| ||| || ||| || ||| |||||| || |||| || | || ||
Sbjct 141423 TGGGCCTCCTCGCTTTCGTACG-GATAGCGCATCAAAATGAACGCATCGGCCATGCCCTG 141481
Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 114357
||||||| || || || | || | ||| || || || | |||| || ||
Sbjct 141482 AACACCGATACCGATCGGCCTGTGCCGCATGTTGGAG---CGCTTCGCCTCCGGTACTGG 141538
Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417
||| | || ||||||||| | || ||||| || | || ||| | || || |
Sbjct 141539 ATAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTT 141598
Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477
||||| | | || | | ||| | || ||| || | || ||||| ||
Sbjct 141599 CAGCTTGGCAAAGTCGTACGTTTT-GTCCGGT--TTCACAAACATGTTCAGCGCGATCGA 141655
Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537
|||| ||| ||||| | | |||||||| | |||||| | || || |||||||
Sbjct 141656 GGCCAAATTGCACACCGCTATTTCATCCTTCGACGAGTACTCCACTATCTCGGTACACAG 141715
Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597
||| |||| ||| |||||||| | ||||| ||||| ||| ||| |||||||||||
Sbjct 141716 ATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTT 141775
Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 114657
||| |||||||| || ||||| ||| || || | || || || ||| | ||
Sbjct 141776 GTACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACCATAGGTC 141835
Query 114658 GGCGGCTGGCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716
|| ||| |||||| | ||| ||||||| ||||||| ||||| || |
Sbjct 141836 CTGTGCCTTCAC-CTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCT 141894
Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776
| |||||||| ||| | || | | || || | | |||||| | || ||
Sbjct 141895 CGAACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCC 141954
Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836
| | | |||| ||||||| |||||| || || |||||||| || || |||| |
Sbjct 141955 ACATTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACA 142014
Query 114837 GATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895
|| | | || | || || | | || || || || |||| ||| || |
Sbjct 142015 TGTCGCGGGCACGCACCTCCTCCTTGCCGGTG-TTTTTCTTCAGATCCAGAAACTCGAAT 142073
Query 114896 ATATCCGCGTGCCACGGTTCCAGGTA 114921
|||||| ||||||| ||||| |||||
Sbjct 142074 ATATCCCCGTGCCATGGTTCGAGGTA 142099
>seq72
Length=881775
Score = 96.9 bits (106), Expect = 4e-15
Identities = 271/410 (66%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| ||||| || ||||||| ||| || || || ||| | || || || || ||
Sbjct 354529 TACCAAGCGTCCACCTCGGAACTGTACGGCAAGGTGGCTGAAACGCCGCAGAACGAAAAG 354470
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 8644
||||| ||||| ||||| || || | | ||||| | | ||| | ||| | ||
Sbjct 354469 ACACCGTTCTACCCACGCTCACCGTACGCCTGTGCAAAGATGTACGGTT-ACTGGATTGT 354411
Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704
|| || || || ||| | || | || || ||| ||| || || |||||||||||
Sbjct 354410 GATAAACTATCGCGAAGCGTACAACATGTTCGCCTGCAACGGGATCCTTTTCAACCACGA 354351
Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGAT--GGTATCAAACAA 8762
||||| || || || | ||||| ||| ||||||||| | ||| | || |
Sbjct 354350 ATCACCGCGCCGAGGAGAAAACTTCGTTACACGCAAGATCACCCGTTCGGTTGCGAAGAT 354291
Query 8763 ATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 8822
||| | | || || |||| | | || |||| || || || | || | ||||||
Sbjct 354290 TTCG-CTC-GGACAGCAAGAGTACCTGGAGCTGGGTAATCTGGACTCGAAGCGTGACTGG 354233
Query 8823 GGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 8882
|| |||||||| ||||| || ||||| |||||||| | | || || ||| | ||||
Sbjct 354232 GGCCACGCCAAAGACTACGTGGAAGCGATGTGGCTGATGATGCAGCAGGAACGGCCGGAA 354173
Query 8883 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGA 8932
|| | |||| | || || ||||| || ||||| || | ||||| || ||
Sbjct 354172 GATTTTGTCATTGCTACCGGGGAAACGCACTCGGTGCGAGAGTTTGTCGA 354123
>seq7
Length=4015228
Score = 82.4 bits (90), Expect = 9e-11
Identities = 127/176 (72%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 172798 CTTCCCACGGAGAGGGAACACACCGTA-GTGATCACGACCAACCACAGAAAGACCAGCAA 172856
||| ||||| | || ||||| ||||| ||| || || || ||||| | || | ||
Sbjct 169998 CTTACCACGCAACGGAAACACTCCGTACGTG-TCGCGTCCGACCACTCCCAACCCGGAAA 170056
Query 172857 CTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGT 172915
| || || || || || ||||| |||||||| | |||||||||||| || | ||||
Sbjct 170057 CGGCCAGCGTTTTGGCCGAATCTCCCTCCGTAAGGATGAGCGTACAGTTGAGCGAATTGC 170116
Query 172916 GCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 172971
| ||| || || | ||| || || |||| ||| ||||| || |||| ||||||||
Sbjct 170117 G-CGTACCAGCGTCGTTGGCGTCTTCCAGCTTCGGAATGCCCTTAATCTTGGACTT 170171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597179090612680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |