Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq57 141 9e-29
seq59 138 1e-27
seq1 107 2e-18
>seq57
Length=1190389
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | || ||||| ||||||| || ||||| || ||||||||||| || |
Sbjct 631297 ACCACCGCGGAGTCGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGA 631356
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||||||||| | ||||| |||||||| || |||||
Sbjct 631357 CAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGG 631416
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||| ||| ||| | || || | || ||
Sbjct 631417 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 631476
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | ||||| |||||||| |||||
Sbjct 631477 CTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 631524
>seq59
Length=1145648
Score = 138 bits (152), Expect = 1e-27
Identities = 913/1463 (62%), Gaps = 38/1463 (3%)
Strand=Plus/Plus
Query 153999 AAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACA 154058
||||||| | || || ||||| | || ||||| ||||||| | ||| || ||
Sbjct 141063 AAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGATTG 141122
Query 154059 TACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTT 154118
|| | ||| ||| |||| ||||| || |||||||| || || ||||| || || |
Sbjct 141123 TAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTCGAA 141182
Query 154119 GCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAAT 154178
|| || ||||| |||| || || || || || | ||||| ||||||||
Sbjct 141183 GCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTTTCC 141242
Query 154179 TTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAA 154238
|| || || ||||||||||| | | | |||| | |||||||| ||||| ||||
Sbjct 141243 TTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGCAGG 141302
Query 154239 ACACCCAAACTCGCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAG 154298
| || || ||||||| | || | |||||| |||| | |||||
Sbjct 141303 ATGCCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCCAAC 141362
Query 154299 TCGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATT 154358
|| || || ||||| || || | ||||| | |||||| |||||||| ||| | | ||
Sbjct 141363 TCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGCTTT 141422
Query 154359 TTGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGA 154418
| ||| | || ||||||||||| | | || | | || |||||||| | || |||
Sbjct 141423 TGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCCTGA 141482
Query 154419 ATGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAA 154478
| || | || | || ||||| | || || || || || | |||||
Sbjct 141483 ACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGATAG 141542
Query 154479 TAATTGATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT 154538
|| || |||||||||||||| || |
Sbjct 141543 TAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTCAGC 141602
Query 154539 GCGACAAAATCAAAC----ACTCCGCTTTTAATAAAACGATTTACA-CAC-ACAGACGCC 154592
| |||| || || |||| ||| | |||| || | || | | | || |||
Sbjct 141603 TTGGCAAAGTCGTACGTTTTGTCCGGTTTCA--CAAAC-ATGTTCAGCGCGATCGAGGCC 141659
Query 154593 AAGTTGCAAACGGCAATTTCTTCAGAACTAC-TGTATTGCACAATTTCTGCGCACAAATT 154651
|| ||||| || || ||||| || | || ||| | ||| || || | |||| |||
Sbjct 141660 AAATTGCACACCGCTATTTCATC-CTTCGACGAGTACTCCACTATCTCGGTACACAGATT 141718
Query 154652 ACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTA 154711
|| |||||||| | ||| | |||||| ||| |||||| || || |||||
Sbjct 141719 GGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCCTTGTA 141778
Query 154712 CAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGACTTC- 154770
|| |||||||| |||||||||||| || | ||| || || || || || | ||
Sbjct 141779 CAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGAT--GGCAAACCATAGGTCC 141836
Query 154771 -GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCA 154829
| |||| || || | |||||||| || ||| || |||||| || ||
Sbjct 141837 TGTGCCTTCACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGCTTCTCG 141896
Query 154830 AACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCAC 154889
|||||| | | ||| | ||| ||||| ||| || || ||||||| ||||
Sbjct 141897 AACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGGCTCCAC 141956
Query 154890 ATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAA 154949
|||||||| | || || | ||| |||| |||||| | ||||| ||||| ||||
Sbjct 141957 ATTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAGAACATG 142016
Query 154950 TCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATG 155009
|| || || || || ||| ||||| ||| | || || ||| || ||||
Sbjct 142017 TCGCGGGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAATATA 142076
Query 155010 TCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCG---TTTTCCTCCTTGA 155066
|| ||||||| || || | || | ||| | ||||| || || || || |||
Sbjct 142077 TCCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGCCACCCTGA 142136
Query 155067 TCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTG 155126
||||||| || | || ||||| ||||||| || || ||| ||| | | |
Sbjct 142137 TCCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGTTCGAAATC 142196
Query 155127 CCGTTGGTGCC----ACGTA--TCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACG 155180
|| || ||||| | ||| | | || ||||| | || || || || |
Sbjct 142197 CCATTCGTGCCGGAGATGTACGTTCCTTTGGCGCGA--ATGC----AGTGCACGTTCAGC 142250
Query 155181 CCCAAACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCT 155240
|| | ||| ||| | |||| || || | ||||| | | | || ||||| || ||
Sbjct 142251 CCGATACCGCCGGCCGATTTGGAAATCAGTGCACACTGCTTTAGCGTATCGTAAATACCC 142310
Query 155241 TTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTG-AGGGCA 155299
| || ||||| || || || | || || || || || | || || | | | |
Sbjct 142311 TCAATACTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGCTGCGTA 142370
Query 155300 GCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTA--AG-TT 155356
| |||||||||| | || || || || ||||| | | ||| | || ||
Sbjct 142371 G-CGGCCGCAAACATGGTCGGTGAGGCATGGGTAAA---GTAGCGCTCGGAAAGCAGATT 142426
Query 155357 GTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAG 155416
||| || |||||||| || |||||||| |||||| |||||||| || |||||||||||
Sbjct 142427 GTACGTCTCGATGGCAGCATCAATGTCTTCACCGTGAATACCGATGGCAACGCGCATCAG 142486
Query 155417 CATGTGTTGAATGCGCTCCGCAA 155439
||||||||| |||||| |||
Sbjct 142487 CATGTGTTGCGGTCGCTCCACAA 142509
>seq1
Length=5975090
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || ||||| | || ||||| || || ||||| || || |
Sbjct 5043160 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 5043101
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| | ||||| ||||||||||||||| | || || |||||||| || || ||
Sbjct 5043100 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGCGGG 5043041
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| || || || || || || ||| ||| ||| | || || | || ||
Sbjct 5043040 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGCTCAACC 5042981
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| ||||||| ||| || ||||| || |||||
Sbjct 5042980 TCGAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 5042934
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || ||||| | || ||||| || || ||||| || || |
Sbjct 5043389 ACCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGA 5043330
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||| ||||||||||| ||| | || || |||||||| || || ||
Sbjct 5043329 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGCGG 5043270
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| ||| ||| | || || | || ||
Sbjct 5043269 GATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGCTCAAC 5043210
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| ||||||| ||| || ||||| || |||||
Sbjct 5043209 CTCGAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 5043162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499498835017240
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