Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq59 161 1e-34
>seq59
Length=1145648
Score = 161 bits (178), Expect = 1e-34
Identities = 1047/1669 (63%), Gaps = 61/1669 (4%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | || || | ||||||||| |||||| || || | || ||||| | || | |
Sbjct 142570 TACAACTATTTCGGCTTCAAAACACTGGAGCGTTCCTATTTGCTGAAGATCAAGGGTAAG 142511
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| ||||||||||| || ||||||||||||| |||||||| |||||||| | |||
Sbjct 142510 ATTGTGGAGCGACCGCAACACATGCTGATGCGCGTTGCCATCGGTATTCACGGTGAAGAC 142451
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG--ACA---TGCGGGACAAGAGGTA---TACCA 93889
|| || ||| | | | ||| ||| ||| | || | || ||||
Sbjct 142450 ATT--GA------TGCTGCCATCGAGACGTACAATCTGCTTTCCGAGCGCTACTTTACCC 142399
Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949
||| | |||||| |||| || | || | | || ||| | || || || || |
Sbjct 142398 ATGCCTCACCGACCATGTTTGCGGCCGCTACGCAGCGTCCGCAGCTTTCGTCTTGCTTTC 142339
Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
|| | || | || |||| || || |||| ||| | || ||| | |||||
Sbjct 142338 TGCTTACCATGTCGGACGACAGTATTGAGGGTATTTACGATACGCTAAAGCAGTGTGCAC 142279
Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069
|| || |||| || || || |||||| | | || ||| | | || |||| ||
Sbjct 142278 TGATTTCCAAATCGGCCGGCGGTATCGGGCTGAACGTGCACTGCATTCGCGCCAAAGGAA 142219
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| |||||| ||| || ||||| | || ||||| | || || ||||| || || | ||
Sbjct 142218 CGTACATCTCCGGCACGAATGGGATTTCGAACGGGTTGGTGCCGATGCTGCGCGTTTACA 142159
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| |||| || |||||||| |||||||| | | || || | || || |||
Sbjct 142158 ACAACACGGCCCGGTACGTGGATCAGGGTGGCAACAAGCGGCCCGGCGCCTTTGCCATCT 142099
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| ||||| || ||||||| ||| | | || | || ||| || ||| |||||
Sbjct 142098 ACCTCGAACCATGGCACGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAACACCGGCA 142039
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || || | | ||| | ||| | |||||||| || ||| | || || || || |||
Sbjct 142038 AGGAGGAGGTGCGTGCCCGCGACATGTTCTACGCCCTGTGGATCCCGGATCTGTTCATGC 141979
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || || ||| ||| ||||| || | || || | || || |||||| ||
Sbjct 141978 AGCGTGTGGAGGCGAACGAAATGTGGAGCCTGATGTGCCCACACGACTGCCCCGGATTGG 141919
Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCA--- 94426
| ||| ||| || || || | |||| || | ||||| | ||||
Sbjct 141918 CTGACACTTGGGGCGAAGAGTTCGAGAAGCTGTACACTGGGTACGAGCAGGAGGGTCGAT 141859
Query 94427 ----AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482
| |||||| || | || | | || ||| | ||| | || |||
Sbjct 141858 TTATACGCCAGG-------TGAAGGCACAGGACCTATGGTTTGCCATCATCGAATCGCAG 141806
Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542
||||| ||||| || ||||| ||| |||||| | |||| |||| ||| |||
Sbjct 141805 GTGGAAACGGGCGTTCCGTACATGCTGTACAAGGATGCGTGCAACCGCAAGAGCAATCAG 141746
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
||| || |||| || ||| | || |||||||| |||||||| || ||||| | ||
Sbjct 141745 CAGAACATCGGCACCATAAAGTGTTCCAATCTGTGTACCGAGATAGTGGAGTACTCGTCG 141686
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662
||| || || || ||||| || ||| ||| ||| ||| || || ||| |
Sbjct 141685 AAGGATGAAATAGCGGTGTGCAATTTGGCCTCGATCGCGCTGAACATGTTTGTGAAACCG 141626
Query 94663 GCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG 94722
| | | |||| || ||| | | | ||| |||| || ||||| ||| |
Sbjct 141625 GACAAAACGT--ACGACTTTGC-CAAGCTGAAGGA-----TG----TCGCG--AAGATTT 141580
Query 94723 -GTCTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780
| | | || ||||||| | ||||| | |||| ||| || || ||||||||| ||
Sbjct 141579 TGACGCGCAATCTGAACAAAATTATCGATATAAACTACTATCCAGTACCGGAGGCGAAGC 141520
Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840
||| ||| || ||| |||| ||||| ||||| || ||||| | || || ||| |
Sbjct 141519 GCTCCAACATGCGGCACAGGCCGATCGGTATCGGTGTTCAGGGCATGGCCGATGCGTTCA 141460
Query 94841 TGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCG 94900
| ||||||| || ||||| | || || |||| | || ||||
Sbjct 141459 TTTTGATGCGCTATCCGTACGAAAGCGAGGAGGCCCAAAAGCTGAACCAACAAATTTTCG 141400
Query 94901 AAAGCATTTATTACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGG 94959
||| || || ||||| || || || | | | || | |||||| | || || |||
Sbjct 141399 AAACAATCTACTACGGAGCATTGGAAGCGAGCTGTG-AGTTGGCC-GCCCG--CGACGGA 141344
Query 94960 CCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG 95019
|| ||||| ||| | || || | | ||||| | |||| ||| | |||
Sbjct 141343 CCGTACGAAACGTACGAAGGGAGTCCGGTAAGCAAAGGCATCCTGCAGTACGAAATGTGG 141284
Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACAC 95079
| | || |||| ||| | | |||| | | | | || || |||
Sbjct 141283 AAGAAGGAACCGTCGGATCTTTGGAATTGGGCCGAGTTGAAGGAAAAAATTGCAAAGCAC 141224
Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139
|| | || ||||||| |||| || ||||| || || || ||||| || ||| |
Sbjct 141223 GGCATCCGCAATTCGCTGCTGTTGGCACCGATGCCTACCGCTTCGACGGCACAAATCTTG 141164
Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199
|| ||||||||||| |||||||| | ||| |||||||| ||||| |||| || || ||
Sbjct 141163 GGTAACAACGAGTCCTTCGAACCGTACACGTCCAACGTTTACAATCGGCGTGTACTTTCC 141104
Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259
|| || || | || | ||| | || || || | || |||| | ||||| |||||
Sbjct 141103 GGCGAGTTTCAGGTGGTGAACCACCATCTGCTGCAAGATTTGACAGCGATGGGTCTGTGG 141044
Query 95260 GGT---GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316
| | |||| | ||||||||| | || | |||||| || | || | ||||
Sbjct 141043 GATCTAGACATG---AAGAACCAAATTCTGTCCAACAACGGATCGATTCAAAGCATCGAA 140987
Query 95317 CAAATACCGGAGGACATCAAGGCGCTCT--ACAAGACCGTGTGGGAGAT 95363
|||||| |||| || | ||| ||| |||| || |||||||||||
Sbjct 140986 TCGATACCGAAGGAAAT--ACGCGATCTGTACAAAACGGTGTGGGAGAT 140940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494578672801160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |