Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20stephensi_20[genbank_20GCA_5F000300775.2_202013-07-19]
23,371 sequences; 221,324,304 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq59 370 1e-97
seq20 107 2e-18
seq43 102 8e-17
seq6 87.8 2e-12
>seq59
Length=1145648
Score = 370 bits (410), Expect = 1e-97
Identities = 1212/1856 (65%), Gaps = 44/1856 (2%)
Strand=Plus/Plus
Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAATTG 152771
|| || ||||| |||| ||| |||||||||||||| || || ||| |||| |
Sbjct 140766 GCCGGTTTTGTTCGCAGATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAG 140825
Query 152772 TGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCTC 152831
|| ||||| |||| | | || |||||| |||||| | || |||||||| |
Sbjct 140826 TGGATCGATGTCAGCTTGCCATAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGAC 140885
Query 152832 TGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTG-CCTTCATCT 152889
||||| || || || ||||| || ||||||| ||| || |||||| || ||||
Sbjct 140886 TGATCGATAAACGCACCCCGGTCAGCAGCCATCTTAATGCA--CGTTTTAACCGAAATCT 140943
Query 152890 CCCAGGCGGTTTTGTACAAAT----TTTTAACGCTATCCGGTATACCTTCAATGTTCTGA 152945
|||| | |||||||||| || | || | | |||||| ||| ||| | |||
Sbjct 140944 CCCACACCGTTTTGTACAGATCGCGTATTTCC----TTCGGTATCGATTCGATGCTTTGA 140999
Query 152946 ATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTTA 153005
|| || || |||| | | ||| ||| || || | ||| ||
Sbjct 141000 ATCGATCCGTTGTTGGACAGAATTTGGTTCTTCATGTCTAGATCCCACAGACCCATCGCT 141059
Query 153006 ATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTC 153065
| | || | | || | ||||| ||||| ||||||||||| | | || || |
Sbjct 141060 GTCAAATCTTGCAGCAGATGGTGGTTCACCACCTGAAACTCGCCGGAAAGTACACGCCGA 141119
Query 153066 AAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTG 153125
|| || ||| ||| | ||||| ||||| ||||| || || | ||||| |||||
Sbjct 141120 TTGTAAACGTTGGACGTGTACGGTTCGAAGGACTCGTTGTTACCCAAGATTTGTGCCGTC 141179
Query 153126 GTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCG 153185
| ||||| ||||| |||| || || ||||| || | ||||||| | ||| |
Sbjct 141180 GAAGCGGTAGGCATCGGTGCCAACAGCAGCGAATTGCGGATGCCGTGCTTTGCAATTTTT 141239
Query 153186 TCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT 153245
||||||||| | ||||| ||| || |||||||| | |||||||| ||||||||
Sbjct 141240 TCCTTCAACTCGGCCCAATTCCAAAGATCCGACGGTTCCTTCTTCCACATTTCGTACTGC 141299
Query 153246 AACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCC 153305
| | ||| || | ||||| || | |||| ||| |||||||| ||||
Sbjct 141300 AGGATGCCTTTGCTTACCGGACTCCCTTCGTACGTTTCGTACGGTCCGTCGCGGGCGGCC 141359
Query 153306 AGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA 153365
| || ||||| || || | || || ||||| || |||||| ||||||| || ||
Sbjct 141360 AACTCACAGCTCGCTTCCAATGCTCCGTAGTAGATTGTTTCGAAAATTTGTTGGTTCAGC 141419
Query 153366 ACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCC 153425
|| || ||||| |||||||| ||||| || | || || ||||||| |||
Sbjct 141420 TTTTGGGCCTCCTCGCTTTCGTACGGATAGCGCATCAAAATGAACGCATCGGCCATGCCC 141479
Query 153426 TGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGA 153485
|| | ||||| ||||| || | ||| | |||| |||| |||| || || |||
Sbjct 141480 TGAACACCGATACCGATCGGCCTGTGCCGCATGTTGGAGCGCTTCGCCTCCGGTACTGGA 141539
Query 153486 TAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTA 153545
|||| || ||||||||||||||| || |||||| || | || | | ||||
Sbjct 141540 TAGTAGTTTATATCGATAATTTTGTTCAGATTGCGCGTCAAAATCTTCGCGACATCCTTC 141599
Query 153546 AGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGAT--TCACGGCAATAG 153603
|| || | || || || || || ||| || | | || || ||| || || |
Sbjct 141600 AGCTTGGCAAAGTCGTACGT---TTTGTC--CGGTTTCACAAACATGTTCAGCGCGATCG 141654
Query 153604 ACGCCAGATTACAGACGGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATCTCGGCGCAG 153662
| |||| ||| || || || | || || || || ||||| ||| ||||||| ||
Sbjct 141655 AGGCCAAATTGCACACCGCTATTTCATCCTTCGACGA-GTACTCCACTATCTCGGTACAC 141713
Query 153663 AGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCT 153722
|| ||| || |||||| ||| | || ||||||||||| ||||| |||||||| ||
Sbjct 141714 AGATTGGAACACTTTATGGTGCCGATGTTCTGCTGATTGCTCTTGCGGTTGCACGCATCC 141773
Query 153723 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGC 153779
||| | ||||||||||| |||| || || || |||| ||||| ||| ||||| ||
Sbjct 141774 TTGTACAGCATGTACGGAACGCCCGTTTCCACCTGCGATTCGATGATGGCAAACC-AT-- 141830
Query 153780 AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGT 153839
|||||||| || |||| | | | | || ||||| |||||| | ||||||
Sbjct 141831 AGGTCCTGTGCCTTCACCTGGCGTATAAATCGACCCTCCTGCTCGTACCCAGTGTACAGC 141890
Query 153840 CGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGC 153899
||| ||||| ||||| | ||| || | ||||| || | || || ||||||||
Sbjct 141891 TTCTCGAACTCTTCGCCCCAAGTGTCAGCCAATCCGGGGCAGTCGTGTGGGCACATCAGG 141950
Query 153900 GACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTAC 153959
|||||| |||| || | || || |||||||||||||||| | ||| || |||||
Sbjct 141951 CTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGATCCGGGATCCACAGGGCGTAG 142010
Query 153960 ATGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACGC 154017
| | |||||| | | ||| |||||| ||| |||| ||||||| || || |
Sbjct 142011 AACATGTCGCG-GGCACGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTC 142069
Query 154018 TATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTC 154074
| | || || ||||||| ||||| | ||||| ||| | ||| || ||| || |
Sbjct 142070 GA-ATATATCCCCGTGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGGCCGCTTGTTGC 142128
Query 154075 CGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGC 154134
| |||||||| |||| || || | |||||| | ||||||| ||| || ||| |||
Sbjct 142129 CACCCTGATCCACGTACCGGGCCGTGTTGTTGTAAACGCGCAGCATCGGCACCAACCCGT 142188
Query 154135 TTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTT 154192
| | | || || || || | ||| | | || |||||| | ||||||||
Sbjct 142189 TCGAAATCCCATTCGTGCCGGA--GATGTACGTTCCTTTGGCGCGAATGCAGTGCACGTT 142246
Query 154193 AACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTC-GC-CCAGCGTCCTGTAG 154250
| || || |||||| | | || || || ||| ||| | || ||||| |||
Sbjct 142247 CAGCCCGATACCGCCGGCCGATTTGGAAAT--CAGTGCACACTGCTTTAGCGTATCGTAA 142304
Query 154251 ATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG 154310
|| || || || || ||||| | | |||| || || || | | ||||||
Sbjct 142305 ATACCCTCAATACTGTCGTCCGACATGGTAAGCAGAAAGCAAGACGAAAGCTGCGGACGC 142364
Query 154311 CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGGCTCATCAT 154369
|||| | |||| ||| | ||| || || || ||||| || | || | ||
Sbjct 142365 TGCGTAGCGGCCGCAAACATGGTCGGTGAGGCATGGGTAAAGTAGCGCTCGG-AAAGCAG 142423
Query 154370 GCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCAT 154429
|||||| |||||||| | || || || || |||||||| |||| || ||||||||
Sbjct 142424 ATTGTACGTCTCGATGGCAGCATCAATGTCTTCACCGTGAATACCGATGGCAACGCGCAT 142483
Query 154430 GAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTC 154489
|||||||| ||||| || || | | || | ||||||| | ||| | ||
Sbjct 142484 CAGCATGTGTTGCGGTCGCTCCACAATCTTACCCTTGATCTTCAGCAAATAGGAACGCTC 142543
Query 154490 GAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545
|| |||||| | |||||||| ||||| | ||||| | || | | ||||||||
Sbjct 142544 CAGTGTTTTGAAGCCGAAATAGTTGTACCCGAAATCACGGTCGTAAATGATGGCCG 142599
>seq20
Length=2346360
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || || || | | | |||||||| || |||||||||||| |
Sbjct 834518 CCTCCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 834577
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||| || || || |||| |||| | |||||| || || |||||
Sbjct 834578 AGAGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 834637
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | ||||| | || ||| |||
Sbjct 834638 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACC 834697
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | || || |||||||| || || || || ||||||||
Sbjct 834698 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 834744
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| || || | | | |||||||| || |||||||||||| || |||||| ||||||
Sbjct 834307 AACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTC 834366
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
|| || || |||| |||| | |||||| || || ||||| ||||| || |||||
Sbjct 834367 CAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 834426
Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584
||| || || | | || | ||||| | || ||| ||||| | ||| | || ||
Sbjct 834427 GATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTT 834486
Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||| || || || || ||||||||
Sbjct 834487 GCCAGTCAGCGTCTTCACGAAGATCTGCAT 834516
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || || || | | | |||||||| || |||||||||||| |
Sbjct 834746 CCTCCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 834805
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| ||||| || || || |||| |||| | |||||| || || |||||
Sbjct 834806 AGAGTACGACCATCCTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 834865
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 834866 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACC 834925
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | || || |||||||| || || || || ||||||||
Sbjct 834926 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 834972
>seq43
Length=1551626
Score = 102 bits (112), Expect = 8e-17
Identities = 201/294 (68%), Gaps = 5/294 (2%)
Strand=Plus/Minus
Query 57148 TTGCCGGTGGTCTTGCTCAGCGGATGTTCGGTGAGGCCGAGATCGTCGCGCTTCGCGTGA 57207
||||| ||||| ||||||||| |||| | || ||||||||||| | | || |||
Sbjct 826286 TTGCCAGTGGTTTTGCTCAGCTCATGTCCTCCCAGCCCGAGATCGTCCGGATCGGCATGA 826227
Query 57208 ACCACCAGACTGCGGCCGACGACGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATC 57267
|| ||||| |||||| || ||| | | || |||| ||| | | ||| |
Sbjct 826226 ACTACCAGCGAGCGGCCCACTACGTTCATCGGTCCACTCAGCGCAATCTGGCTCGCGACC 826167
Query 57268 TTGTCCAC-TTCGGTGAGGGCGTTGGACACTTTGGCCTCGACGTTGCCCAAGTCGCCGAC 57326
|||||| |||| | || ||| | | || ||| |||||||| ||| ||| |
Sbjct 826166 AAGTCCACCTTCGCTTCAC-CGCTGG---CGTCCGCTACGATGTTGCCCATGTCACCGGC 826111
Query 57327 GTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCGCTGCCGGTGGGGTTAAAGTGCTCGCC 57386
|| ||| || |||| | || || |||||| ||||| ||||| ||||| ||||
Sbjct 826110 ATGGCGCTCGTCCGCATCCGGGGCACCGTGTGTTTTGCCGTGCGGGTTGAAGTGAGCGCC 826051
Query 57387 CGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTGAACGTGAAATCCGTG 57440
|| ||| |||| |||||| || |||| ||||||||||| | ||| ||||| ||
Sbjct 826050 CGTGGACATGCAACCGTTGGTGTTGTCTCCGAACTCGTGGATGTGGAATCCATG 825997
>seq6
Length=4219845
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| || | || | ||| | | | |||||||| || ||||||||||||
Sbjct 2100918 GCCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2100977
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || |||||| || || ||||||| |||| |||||||| || ||||| ||
Sbjct 2100978 CAGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGG 2101037
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | || || | | ||| ||
Sbjct 2101038 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGCTCGAC 2101097
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || ||||| || || ||||| || || ||||||||
Sbjct 2101098 CTCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 2101145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496117423143120
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